Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2040

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
2,406,673	-		Echvi_2039	0.48	-1.2
2,406,711	+		Echvi_2039	0.50	-0.0
2,406,741	-		Echvi_2039	0.52	-0.5
2,406,766	+		Echvi_2039	0.53	+0.8
2,406,766	+		Echvi_2039	0.53	-0.1
2,406,766	+		Echvi_2039	0.53	-0.2
2,406,767	-		Echvi_2039	0.53	-0.2
2,406,767	-		Echvi_2039	0.53	-0.2
2,406,767	-		Echvi_2039	0.53	+0.8
2,406,767	-		Echvi_2039	0.53	+0.8
2,406,767	-		Echvi_2039	0.53	-0.1
2,406,767	-		Echvi_2039	0.53	-2.0
2,406,771	+		Echvi_2039	0.53	-0.5
2,406,772	-		Echvi_2039	0.53	+0.9
2,406,772	-		Echvi_2039	0.53	+0.5
2,406,855	+		Echvi_2039	0.58	-0.0
2,406,856	-		Echvi_2039	0.58	-0.5
2,406,860	+		Echvi_2039	0.58	-0.1
2,406,861	-		Echvi_2039	0.58	-0.6
2,406,924	-		Echvi_2039	0.62	-0.3
2,406,924	-		Echvi_2039	0.62	+0.1
2,406,933	+		Echvi_2039	0.62	-0.3
2,406,940	+		Echvi_2039	0.63	-0.2
2,406,940	+		Echvi_2039	0.63	-1.5
2,406,941	-		Echvi_2039	0.63	+0.2
2,406,941	-		Echvi_2039	0.63	-0.4
2,406,943	-		Echvi_2039	0.63	-1.1
2,406,995	+		Echvi_2039	0.66	-0.1
2,406,995	+		Echvi_2039	0.66	+0.5
2,406,995	+		Echvi_2039	0.66	+0.8
2,406,995	+		Echvi_2039	0.66	-0.8
2,406,996	-		Echvi_2039	0.66	+0.1
2,406,996	-		Echvi_2039	0.66	-1.2
2,407,044	+		Echvi_2039	0.68	-0.2
2,407,045	-		Echvi_2039	0.68	-0.5
2,407,091	-		Echvi_2039	0.71	-1.2
2,407,156	+		Echvi_2039	0.74	-0.7
2,407,156	+		Echvi_2039	0.74	-1.0
2,407,156	+		Echvi_2039	0.74	-1.2
2,407,156	+		Echvi_2039	0.74	-1.5
2,407,156	+		Echvi_2039	0.74	-0.8
2,407,157	-		Echvi_2039	0.74	+1.1
2,407,157	-		Echvi_2039	0.74	-0.5
2,407,157	-		Echvi_2039	0.74	-0.1
2,407,157	-		Echvi_2039	0.74	-0.5
2,407,201	+		Echvi_2039	0.77	+1.4
2,407,201	+		Echvi_2039	0.77	-0.2
2,407,201	+		Echvi_2039	0.77	+0.7
2,407,201	+		Echvi_2039	0.77	+0.4
2,407,202	-		Echvi_2039	0.77	-2.2
2,407,202	-		Echvi_2039	0.77	-1.2
2,407,202	-		Echvi_2039	0.77	-1.0
2,407,202	-		Echvi_2039	0.77	-0.6
2,407,222	+		Echvi_2039	0.78	-1.1
2,407,223	-		Echvi_2039	0.78	-0.2
2,407,325	-		Echvi_2039	0.84	-1.5
2,407,325	-		Echvi_2039	0.84	-2.8
2,407,440	-		Echvi_2039	0.90	-0.0
2,407,487	-				-0.7
2,407,551	+				+0.8
2,407,683	-				+0.2
2,407,683	-				-0.9
2,407,806	+		Echvi_2040	0.10	+0.3
2,407,807	-		Echvi_2040	0.10	-0.0
2,407,807	-		Echvi_2040	0.10	-0.5
2,407,810	-		Echvi_2040	0.11	+0.4
2,407,841	+		Echvi_2040	0.13	+3.1
2,407,855	-		Echvi_2040	0.14	+0.5
2,407,855	-		Echvi_2040	0.14	+0.4
2,407,900	-		Echvi_2040	0.17	+1.4
2,407,981	+		Echvi_2040	0.24	-0.1
2,407,982	-		Echvi_2040	0.24	-0.6
2,408,027	-		Echvi_2040	0.27	-0.4
2,408,027	-		Echvi_2040	0.27	+1.8
2,408,027	-		Echvi_2040	0.27	+0.1
2,408,043	+		Echvi_2040	0.28	+1.6
2,408,142	-		Echvi_2040	0.36	-1.2
2,408,143	+		Echvi_2040	0.36	-0.8
2,408,144	-		Echvi_2040	0.36	+0.8
2,408,144	-		Echvi_2040	0.36	-0.2
2,408,148	-		Echvi_2040	0.36	+0.7
2,408,148	-		Echvi_2040	0.36	+0.6
2,408,148	-		Echvi_2040	0.36	+1.5
2,408,148	-		Echvi_2040	0.36	-0.4
2,408,148	-		Echvi_2040	0.36	-0.9
2,408,148	-		Echvi_2040	0.36	+0.5
2,408,148	-		Echvi_2040	0.36	-0.5
2,408,149	+		Echvi_2040	0.37	+0.3
2,408,149	+		Echvi_2040	0.37	-0.8
2,408,202	-		Echvi_2040	0.41	-2.0
2,408,202	-		Echvi_2040	0.41	+0.8
2,408,236	+		Echvi_2040	0.43	+0.4
2,408,240	+		Echvi_2040	0.44	-0.8
2,408,240	+		Echvi_2040	0.44	+1.8
2,408,240	+		Echvi_2040	0.44	+0.2
2,408,240	+		Echvi_2040	0.44	+1.2
2,408,240	+		Echvi_2040	0.44	+0.4
2,408,240	+		Echvi_2040	0.44	+2.8
2,408,241	-		Echvi_2040	0.44	-0.4
2,408,241	-		Echvi_2040	0.44	-1.0
2,408,241	-		Echvi_2040	0.44	-0.4
2,408,241	-		Echvi_2040	0.44	-0.4
2,408,241	-		Echvi_2040	0.44	+1.1
2,408,241	-		Echvi_2040	0.44	+1.1
2,408,283	+		Echvi_2040	0.47	+1.4
2,408,284	-		Echvi_2040	0.47	-0.3
2,408,338	+		Echvi_2040	0.51	+1.8
2,408,338	+		Echvi_2040	0.51	+0.5
2,408,338	+		Echvi_2040	0.51	-0.8
2,408,338	+		Echvi_2040	0.51	+1.4
2,408,339	-		Echvi_2040	0.51	+0.2
2,408,339	-		Echvi_2040	0.51	-0.3
2,408,339	-		Echvi_2040	0.51	-1.1
2,408,409	-		Echvi_2040	0.57	-0.6
2,408,468	-		Echvi_2040	0.61	+0.1
2,408,566	+		Echvi_2040	0.69	+1.1
2,408,618	+		Echvi_2040	0.73	+0.0
2,408,618	+		Echvi_2040	0.73	+0.8
2,408,620	+		Echvi_2040	0.73	+0.2
2,408,621	-		Echvi_2040	0.73	+0.4
2,408,621	-		Echvi_2040	0.73	-0.6
2,408,621	-		Echvi_2040	0.73	-1.0
2,408,621	-		Echvi_2040	0.73	+0.7
2,408,780	+		Echvi_2040	0.85	-0.2
2,408,781	-		Echvi_2040	0.85	-0.1
2,408,781	-		Echvi_2040	0.85	-0.3
2,408,806	-		Echvi_2040	0.87	+0.3
2,408,808	-		Echvi_2040	0.87	+0.1
2,408,957	-				-1.2
2,408,965	-				-0.7
2,408,983	-				+0.2
2,409,062	-				-0.2
2,409,064	-				-0.2
2,409,064	-				-0.0
2,409,108	+				+1.0
2,409,108	+				-0.4
2,409,108	+				-0.1
2,409,110	+				+0.1
2,409,279	-				-0.6
2,409,364	-				-1.5
2,409,382	+				+0.2
2,409,382	+				+1.0
2,409,383	-				-0.3
2,409,383	-				+0.6
2,409,383	-				-1.5
2,409,487	-				+0.1
2,409,487	-				-0.3
2,409,590	+		Echvi_2042	0.12	+0.5
2,409,590	+		Echvi_2042	0.12	-0.1
2,409,591	-		Echvi_2042	0.12	-0.2
2,409,591	-		Echvi_2042	0.12	+0.1
2,409,650	+		Echvi_2042	0.17	-0.9
2,409,728	-		Echvi_2042	0.23	-0.4
2,409,731	-		Echvi_2042	0.24	-0.8
2,409,731	-		Echvi_2042	0.24	+0.8
2,409,731	-		Echvi_2042	0.24	+0.5
2,409,817	-		Echvi_2042	0.31	+0.3
2,409,850	+		Echvi_2042	0.33	-0.1
2,409,922	-		Echvi_2042	0.39	-1.0
2,409,926	-		Echvi_2042	0.39	-0.9
2,409,942	-		Echvi_2042	0.41	-0.9
2,409,959	-		Echvi_2042	0.42	+0.3
2,409,965	+		Echvi_2042	0.42	+0.1
2,409,965	+		Echvi_2042	0.42	-1.5
2,409,966	-		Echvi_2042	0.42	-0.2
2,409,967	+		Echvi_2042	0.43	-0.2
2,409,967	+		Echvi_2042	0.43	-1.8
2,409,968	-		Echvi_2042	0.43	+0.4