Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12560 and PS417_12565 are separated by 45 nucleotides PS417_12565 and PS417_12570 overlap by 8 nucleotides
PS417_12560: PS417_12560 - MFS transporter, at 2,732,656 to 2,733,948
_12560
PS417_12565: PS417_12565 - 2-dehydro-3-deoxygluconokinase, at 2,733,994 to 2,734,935
_12565
PS417_12570: PS417_12570 - AP endonuclease, at 2,734,928 to 2,735,710
_12570
Position (kb)
2734
2735
2736 Strain fitness (log2 ratio)
-2
-1
0
1 at 2733.988 kb on - strand at 2733.988 kb on - strand at 2734.094 kb on - strand, within PS417_12565 at 2734.286 kb on + strand, within PS417_12565 at 2734.287 kb on - strand, within PS417_12565 at 2734.935 kb on + strand at 2734.935 kb on + strand at 2734.935 kb on + strand at 2734.935 kb on + strand at 2734.936 kb on - strand at 2734.936 kb on - strand at 2735.041 kb on + strand, within PS417_12570 at 2735.045 kb on - strand, within PS417_12570 at 2735.158 kb on - strand, within PS417_12570 at 2735.327 kb on + strand, within PS417_12570 at 2735.327 kb on + strand, within PS417_12570 at 2735.704 kb on + strand at 2735.704 kb on + strand at 2735.705 kb on - strand at 2735.705 kb on - strand at 2735.805 kb on - strand at 2736.400 kb on + strand at 2736.401 kb on - strand at 2736.452 kb on + strand at 2736.453 kb on - strand at 2736.495 kb on + strand at 2736.495 kb on + strand at 2736.496 kb on - strand at 2736.565 kb on + strand at 2736.566 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 2,733,988 - -1.0 2,733,988 - -1.2 2,734,094 - PS417_12565 0.11 -0.8 2,734,286 + PS417_12565 0.31 -0.4 2,734,287 - PS417_12565 0.31 -1.6 2,734,935 + -1.5 2,734,935 + -0.8 2,734,935 + -1.7 2,734,935 + -0.7 2,734,936 - -0.4 2,734,936 - -0.8 2,735,041 + PS417_12570 0.14 -1.4 2,735,045 - PS417_12570 0.15 -0.5 2,735,158 - PS417_12570 0.29 -1.1 2,735,327 + PS417_12570 0.51 -1.0 2,735,327 + PS417_12570 0.51 -1.2 2,735,704 + -1.9 2,735,704 + -0.3 2,735,705 - -0.9 2,735,705 - -2.1 2,735,805 - -0.4 2,736,400 + -0.5 2,736,401 - -0.5 2,736,452 + -1.1 2,736,453 - -0.5 2,736,495 + -0.4 2,736,495 + -0.1 2,736,496 - -0.0 2,736,565 + -0.7 2,736,566 - -2.1
Or see this region's nucleotide sequence