Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26895 and PS417_26900 are separated by 241 nucleotides PS417_26900 and PS417_26905 are separated by 96 nucleotides PS417_26905 and PS417_26910 are separated by 69 nucleotides
PS417_26895: PS417_26895 - phosphorylcholine phosphatase, at 5,807,963 to 5,809,021
_26895
PS417_26900: PS417_26900 - L-cystine transporter tcyP, at 5,809,263 to 5,810,654
_26900
PS417_26905: PS417_26905 - diacylglycerol kinase, at 5,810,751 to 5,811,263
_26905
PS417_26910: PS417_26910 - membrane protein, at 5,811,333 to 5,812,703
_26910
Position (kb) 5809
5810
5811 Strain fitness (log2 ratio) -1
0
1
2 at 5808.402 kb on + strand, within PS417_26895 at 5808.461 kb on + strand, within PS417_26895 at 5808.461 kb on + strand, within PS417_26895 at 5808.461 kb on + strand, within PS417_26895 at 5808.461 kb on + strand, within PS417_26895 at 5808.461 kb on + strand, within PS417_26895 at 5808.462 kb on - strand, within PS417_26895 at 5808.462 kb on - strand, within PS417_26895 at 5808.462 kb on - strand, within PS417_26895 at 5808.462 kb on - strand, within PS417_26895 at 5808.465 kb on + strand, within PS417_26895 at 5808.465 kb on + strand, within PS417_26895 at 5808.465 kb on + strand, within PS417_26895 at 5808.465 kb on + strand, within PS417_26895 at 5808.465 kb on + strand, within PS417_26895 at 5808.466 kb on - strand, within PS417_26895 at 5808.466 kb on - strand, within PS417_26895 at 5808.466 kb on - strand, within PS417_26895 at 5808.466 kb on - strand, within PS417_26895 at 5808.706 kb on - strand, within PS417_26895 at 5808.706 kb on - strand, within PS417_26895 at 5808.708 kb on + strand, within PS417_26895 at 5808.754 kb on + strand at 5808.754 kb on + strand, within PS417_26895 at 5808.810 kb on + strand, within PS417_26895 at 5808.810 kb on + strand, within PS417_26895 at 5808.811 kb on - strand, within PS417_26895 at 5808.811 kb on - strand, within PS417_26895 at 5808.811 kb on - strand, within PS417_26895 at 5808.877 kb on + strand, within PS417_26895 at 5808.878 kb on - strand, within PS417_26895 at 5809.187 kb on + strand at 5809.288 kb on + strand at 5809.289 kb on - strand at 5809.289 kb on - strand at 5809.289 kb on - strand at 5809.289 kb on - strand at 5809.363 kb on + strand at 5809.363 kb on + strand at 5809.363 kb on + strand at 5809.364 kb on - strand at 5809.375 kb on + strand at 5809.476 kb on + strand, within PS417_26900 at 5809.477 kb on - strand, within PS417_26900 at 5809.514 kb on - strand, within PS417_26900 at 5810.005 kb on + strand, within PS417_26900 at 5810.606 kb on + strand at 5810.753 kb on - strand at 5811.298 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 5,808,402 + PS417_26895 0.41 +0.4 5,808,461 + PS417_26895 0.47 +1.8 5,808,461 + PS417_26895 0.47 -1.2 5,808,461 + PS417_26895 0.47 +0.2 5,808,461 + PS417_26895 0.47 -0.8 5,808,461 + PS417_26895 0.47 -0.1 5,808,462 - PS417_26895 0.47 -0.0 5,808,462 - PS417_26895 0.47 +0.1 5,808,462 - PS417_26895 0.47 +0.2 5,808,462 - PS417_26895 0.47 -0.5 5,808,465 + PS417_26895 0.47 -0.0 5,808,465 + PS417_26895 0.47 +0.4 5,808,465 + PS417_26895 0.47 -0.0 5,808,465 + PS417_26895 0.47 +1.5 5,808,465 + PS417_26895 0.47 +0.1 5,808,466 - PS417_26895 0.47 -0.1 5,808,466 - PS417_26895 0.47 -0.0 5,808,466 - PS417_26895 0.47 +0.3 5,808,466 - PS417_26895 0.47 -0.1 5,808,706 - PS417_26895 0.70 -0.2 5,808,706 - PS417_26895 0.70 +0.4 5,808,708 + PS417_26895 0.70 -0.5 5,808,754 + -0.6 5,808,754 + PS417_26895 0.75 -0.2 5,808,810 + PS417_26895 0.80 +0.3 5,808,810 + PS417_26895 0.80 -1.5 5,808,811 - PS417_26895 0.80 -0.0 5,808,811 - PS417_26895 0.80 +0.7 5,808,811 - PS417_26895 0.80 +0.3 5,808,877 + PS417_26895 0.86 +1.1 5,808,878 - PS417_26895 0.86 +1.0 5,809,187 + -1.4 5,809,288 + +0.4 5,809,289 - +0.2 5,809,289 - +0.7 5,809,289 - +1.0 5,809,289 - -0.2 5,809,363 + +2.7 5,809,363 + -0.2 5,809,363 + +0.3 5,809,364 - +0.2 5,809,375 + +0.1 5,809,476 + PS417_26900 0.15 +1.4 5,809,477 - PS417_26900 0.15 +0.7 5,809,514 - PS417_26900 0.18 -0.8 5,810,005 + PS417_26900 0.53 +0.8 5,810,606 + +0.1 5,810,753 - -0.3 5,811,298 + -1.6
Or see this region's nucleotide sequence