Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22465 and PS417_22470 are separated by 107 nucleotides PS417_22470 and PS417_22475 are separated by 168 nucleotides PS417_22475 and PS417_22480 are separated by 180 nucleotides
PS417_22465: PS417_22465 - aspartyl-tRNA synthetase, at 4,864,017 to 4,865,792
_22465
PS417_22470: PS417_22470 - FmdB family transcriptional regulator, at 4,865,900 to 4,866,121
_22470
PS417_22475: PS417_22475 - hypothetical protein, at 4,866,290 to 4,866,622
_22475
PS417_22480: PS417_22480 - ferritin, at 4,866,803 to 4,867,276
_22480
Position (kb) 4865
4866
4867 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4865.850 kb on - strand at 4865.850 kb on - strand at 4865.850 kb on - strand at 4865.855 kb on - strand at 4865.855 kb on - strand at 4865.855 kb on - strand at 4866.105 kb on + strand at 4866.105 kb on + strand at 4866.106 kb on - strand at 4866.106 kb on - strand at 4866.106 kb on - strand at 4866.111 kb on + strand at 4866.112 kb on - strand at 4866.112 kb on - strand at 4866.112 kb on - strand at 4866.112 kb on - strand at 4866.112 kb on - strand at 4866.112 kb on - strand at 4866.203 kb on - strand at 4866.203 kb on - strand at 4866.203 kb on - strand at 4866.205 kb on - strand at 4866.399 kb on + strand, within PS417_22475 at 4866.400 kb on - strand, within PS417_22475 at 4866.400 kb on - strand, within PS417_22475 at 4866.455 kb on - strand, within PS417_22475 at 4866.455 kb on - strand, within PS417_22475 at 4866.462 kb on + strand, within PS417_22475 at 4866.462 kb on + strand, within PS417_22475 at 4866.462 kb on + strand, within PS417_22475 at 4866.569 kb on + strand, within PS417_22475 at 4866.569 kb on + strand, within PS417_22475 at 4866.570 kb on - strand, within PS417_22475 at 4866.575 kb on - strand, within PS417_22475 at 4866.622 kb on + strand at 4866.622 kb on + strand at 4866.622 kb on + strand at 4866.622 kb on + strand at 4866.622 kb on + strand at 4866.622 kb on + strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.734 kb on + strand at 4866.956 kb on + strand, within PS417_22480 at 4866.957 kb on - strand, within PS417_22480 at 4866.957 kb on - strand, within PS417_22480 at 4867.026 kb on + strand, within PS417_22480 at 4867.027 kb on - strand, within PS417_22480 at 4867.035 kb on + strand, within PS417_22480 at 4867.036 kb on - strand, within PS417_22480 at 4867.036 kb on - strand, within PS417_22480 at 4867.110 kb on + strand, within PS417_22480 at 4867.111 kb on - strand, within PS417_22480
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 4,865,850 - -1.4 4,865,850 - -0.0 4,865,850 - +0.1 4,865,855 - -1.3 4,865,855 - +0.5 4,865,855 - +0.0 4,866,105 + -1.1 4,866,105 + +0.5 4,866,106 - -0.9 4,866,106 - -0.3 4,866,106 - -0.7 4,866,111 + +0.5 4,866,112 - +0.4 4,866,112 - +0.5 4,866,112 - -0.3 4,866,112 - -1.9 4,866,112 - +0.3 4,866,112 - +0.3 4,866,203 - -0.2 4,866,203 - -0.0 4,866,203 - -0.2 4,866,205 - +0.3 4,866,399 + PS417_22475 0.33 +0.0 4,866,400 - PS417_22475 0.33 -1.6 4,866,400 - PS417_22475 0.33 +0.4 4,866,455 - PS417_22475 0.50 +0.4 4,866,455 - PS417_22475 0.50 +0.6 4,866,462 + PS417_22475 0.52 -0.8 4,866,462 + PS417_22475 0.52 +1.1 4,866,462 + PS417_22475 0.52 +0.4 4,866,569 + PS417_22475 0.84 +0.2 4,866,569 + PS417_22475 0.84 +0.6 4,866,570 - PS417_22475 0.84 +0.1 4,866,575 - PS417_22475 0.86 -0.3 4,866,622 + +0.1 4,866,622 + +2.9 4,866,622 + -0.7 4,866,622 + +1.1 4,866,622 + -0.1 4,866,622 + +0.2 4,866,623 - +0.2 4,866,623 - -0.3 4,866,623 - +0.1 4,866,623 - -0.6 4,866,623 - -0.0 4,866,623 - -0.3 4,866,623 - +0.2 4,866,623 - +0.5 4,866,623 - -0.8 4,866,734 + -0.0 4,866,956 + PS417_22480 0.32 +0.3 4,866,957 - PS417_22480 0.32 -0.1 4,866,957 - PS417_22480 0.32 +0.6 4,867,026 + PS417_22480 0.47 +0.3 4,867,027 - PS417_22480 0.47 -0.7 4,867,035 + PS417_22480 0.49 -0.2 4,867,036 - PS417_22480 0.49 -1.1 4,867,036 - PS417_22480 0.49 +0.5 4,867,110 + PS417_22480 0.65 +1.2 4,867,111 - PS417_22480 0.65 +0.3
Or see this region's nucleotide sequence