Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3542

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
4,198,707	-		Echvi_3541	0.57	+0.6
4,198,730	+		Echvi_3541	0.58	-0.7
4,198,761	+		Echvi_3541	0.60	-0.5
4,198,761	+		Echvi_3541	0.60	-1.2
4,198,762	-		Echvi_3541	0.60	-0.5
4,198,762	-		Echvi_3541	0.60	+1.5
4,198,762	-		Echvi_3541	0.60	+0.4
4,198,784	+		Echvi_3541	0.62	+0.1
4,198,812	+		Echvi_3541	0.63	-0.1
4,198,813	-		Echvi_3541	0.64	-0.9
4,198,874	+		Echvi_3541	0.67	+0.4
4,198,875	-		Echvi_3541	0.67	+0.6
4,198,905	-		Echvi_3541	0.69	+0.6
4,198,905	-		Echvi_3541	0.69	-0.5
4,198,909	-		Echvi_3541	0.70	-0.8
4,198,909	-		Echvi_3541	0.70	-0.7
4,198,909	-		Echvi_3541	0.70	+1.5
4,199,006	+		Echvi_3541	0.76	-0.4
4,199,007	-		Echvi_3541	0.76	-1.2
4,199,047	+		Echvi_3541	0.78	-0.1
4,199,048	-		Echvi_3541	0.78	-1.2
4,199,064	-		Echvi_3541	0.79	+0.8
4,199,125	-		Echvi_3541	0.83	-0.1
4,199,125	-		Echvi_3541	0.83	+0.2
4,199,180	+		Echvi_3541	0.86	-0.9
4,199,394	+				-0.2
4,199,462	+				+0.1
4,199,552	+				+1.1
4,199,552	+				+0.5
4,199,552	+				-0.9
4,199,553	-				+1.5
4,199,557	+				-0.8
4,199,558	-				+0.2
4,199,586	+				-0.1
4,199,598	+				+0.1
4,199,598	+				-0.2
4,199,599	-				-0.5
4,199,599	-				+0.0
4,199,620	-				-0.9
4,199,620	-				+0.7
4,199,628	-				-1.8
4,199,630	+				+0.3
4,199,630	+				-0.0
4,199,631	-				-0.3
4,199,631	-				-0.2
4,199,639	-				-0.0
4,199,639	-				-0.5
4,199,639	-				+0.2
4,199,641	+				+0.5
4,199,642	-				-1.6
4,199,642	-				+0.5
4,199,664	+				+0.2
4,199,665	-				-0.2
4,199,665	-				-0.9
4,199,682	+				+1.6
4,199,787	-				+0.2
4,199,787	-				+0.3
4,199,787	-				-0.9
4,199,821	+				-0.6
4,199,828	-				+0.5
4,199,828	-				-0.7
4,199,828	-				-0.3
4,199,838	-				+0.4
4,199,998	+		Echvi_3542	0.15	+2.7
4,200,016	-		Echvi_3542	0.15	-0.9
4,200,050	+		Echvi_3542	0.17	+0.6
4,200,051	-		Echvi_3542	0.17	+0.3
4,200,057	+		Echvi_3542	0.17	-0.4
4,200,058	-		Echvi_3542	0.17	-0.9
4,200,058	-		Echvi_3542	0.17	+0.0
4,200,058	-		Echvi_3542	0.17	+0.3
4,200,169	+		Echvi_3542	0.22	+0.5
4,200,169	+		Echvi_3542	0.22	-0.5
4,200,170	-		Echvi_3542	0.22	+1.9
4,200,264	-		Echvi_3542	0.26	+0.6
4,200,264	-		Echvi_3542	0.26	-0.5
4,200,321	+		Echvi_3542	0.29	+0.8
4,200,321	+		Echvi_3542	0.29	-0.4
4,200,322	-		Echvi_3542	0.29	-0.5
4,200,444	+		Echvi_3542	0.34	-0.1
4,200,445	-		Echvi_3542	0.35	-1.6
4,200,445	-		Echvi_3542	0.35	+0.1
4,200,561	-		Echvi_3542	0.40	+0.0
4,200,600	+		Echvi_3542	0.41	-0.6
4,200,600	+		Echvi_3542	0.41	+1.8
4,200,600	+		Echvi_3542	0.41	-1.7
4,200,600	+		Echvi_3542	0.41	-1.2
4,200,601	-		Echvi_3542	0.41	+0.6
4,200,608	-		Echvi_3542	0.42	+0.8
4,200,620	-		Echvi_3542	0.42	-0.3
4,200,709	+		Echvi_3542	0.46	-0.1
4,200,709	+		Echvi_3542	0.46	+1.1
4,200,744	+		Echvi_3542	0.48	+0.7
4,200,745	-		Echvi_3542	0.48	-0.3
4,200,745	-		Echvi_3542	0.48	+0.3
4,200,745	-		Echvi_3542	0.48	-0.2
4,200,746	+		Echvi_3542	0.48	-0.2
4,200,746	+		Echvi_3542	0.48	+0.7
4,200,967	+		Echvi_3542	0.58	+1.1
4,200,982	+		Echvi_3542	0.58	+1.1
4,201,004	+		Echvi_3542	0.59	-0.1
4,201,005	-		Echvi_3542	0.59	-0.0
4,201,005	-		Echvi_3542	0.59	+0.2
4,201,030	-		Echvi_3542	0.61	-1.2
4,201,087	+		Echvi_3542	0.63	-0.6
4,201,173	+		Echvi_3542	0.67	+0.1
4,201,173	+		Echvi_3542	0.67	+1.7
4,201,177	-		Echvi_3542	0.67	+0.8
4,201,226	+		Echvi_3542	0.69	+1.5
4,201,227	-		Echvi_3542	0.69	+0.1
4,201,227	-		Echvi_3542	0.69	-2.4
4,201,232	+		Echvi_3542	0.70	+0.4
4,201,233	-		Echvi_3542	0.70	+0.6
4,201,233	-		Echvi_3542	0.70	+1.1
4,201,280	+		Echvi_3542	0.72	-0.5
4,201,316	-		Echvi_3542	0.73	+0.3
4,201,426	-		Echvi_3542	0.78	-0.1
4,201,452	-		Echvi_3542	0.79	+1.2
4,201,470	+		Echvi_3542	0.80	+0.6
4,201,471	-		Echvi_3542	0.80	+0.6
4,201,580	-		Echvi_3542	0.85	+0.8
4,201,585	+		Echvi_3542	0.85	-0.9
4,201,716	+				+0.7
4,201,716	+				-1.2
4,201,717	-				-0.8
4,201,717	-				+0.2
4,201,717	-				+0.5
4,201,740	+				+0.1
4,201,821	-				-0.5
4,201,914	-				+1.1
4,201,914	-				+0.6
4,201,921	-				-0.2
4,201,989	+				+0.2
4,201,990	-				+0.8
4,202,006	-				+0.5
4,202,010	+				-0.5
4,202,022	-				-0.0
4,202,022	-				+1.1
4,202,027	-				+1.7
4,202,060	+				+0.8
4,202,064	+				+0.8
4,202,166	+				+0.6
4,202,166	+				-0.1
4,202,167	-				-0.1
4,202,167	-				+2.4
4,202,236	+		Echvi_3543	0.13	-0.2
4,202,255	+		Echvi_3543	0.14	+1.1
4,202,255	+		Echvi_3543	0.14	+0.4
4,202,255	+		Echvi_3543	0.14	-0.9
4,202,256	-		Echvi_3543	0.14	+0.6
4,202,256	-		Echvi_3543	0.14	-0.9
4,202,256	-		Echvi_3543	0.14	+0.1
4,202,256	-		Echvi_3543	0.14	-0.3
4,202,293	-		Echvi_3543	0.16	+0.6
4,202,293	-		Echvi_3543	0.16	-0.1
4,202,298	-		Echvi_3543	0.16	-0.7
4,202,348	-		Echvi_3543	0.19	-1.9
4,202,352	-		Echvi_3543	0.19	-0.2
4,202,395	-		Echvi_3543	0.22	-0.3
4,202,403	+		Echvi_3543	0.22	-1.5
4,202,404	-				+1.1
4,202,489	+		Echvi_3543	0.28	-0.8
4,202,491	+		Echvi_3543	0.28	+0.5
4,202,491	+		Echvi_3543	0.28	-0.2
4,202,491	+		Echvi_3543	0.28	+0.1
4,202,491	+		Echvi_3543	0.28	+0.3
4,202,491	+		Echvi_3543	0.28	+0.0
4,202,492	-				-1.2
4,202,776	+		Echvi_3543	0.45	+0.1
4,202,777	-		Echvi_3543	0.45	-0.6
4,202,803	+		Echvi_3543	0.46	+1.1
4,202,803	+		Echvi_3543	0.46	+0.9
4,202,803	+		Echvi_3543	0.46	+0.0
4,202,803	+		Echvi_3543	0.46	-0.7
4,202,803	+		Echvi_3543	0.46	+0.1
4,202,804	-		Echvi_3543	0.46	-0.3
4,202,804	-		Echvi_3543	0.46	+1.4
4,202,804	-		Echvi_3543	0.46	+1.1
4,202,804	-		Echvi_3543	0.46	-0.2
4,202,836	+		Echvi_3543	0.48	-0.2
4,202,836	+		Echvi_3543	0.48	+0.5
4,202,837	-		Echvi_3543	0.48	+1.1
4,202,837	-		Echvi_3543	0.48	-0.7
4,202,837	-		Echvi_3543	0.48	-1.7