Strain Fitness in Agrobacterium fabrum C58 around Atu2794

Experiment: R2A with Nitrofurantoin 0.4 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nitrofurantoin 0.4 mg/mL
2,795,381	+		Atu2793	0.26	-1.1
2,795,412	+		Atu2793	0.29	-1.2
2,795,489	-		Atu2793	0.34	+1.1
2,795,578	-		Atu2793	0.41	-0.0
2,795,589	-		Atu2793	0.42	-0.6
2,795,661	-		Atu2793	0.48	-0.5
2,795,732	+		Atu2793	0.53	-1.4
2,795,754	-		Atu2793	0.55	-2.3
2,795,778	+		Atu2793	0.56	+0.7
2,795,780	-		Atu2793	0.57	-1.1
2,796,166	-		Atu2793	0.86	-1.2
2,796,218	+		Atu2793	0.90	-1.8
2,796,249	+				-1.3
2,796,249	+				-2.2
2,796,289	+				-0.6
2,796,347	+				+0.3
2,796,362	+				-1.5
2,796,537	-		Atu2794	0.24	-0.4
2,796,537	-		Atu2794	0.24	-0.4
2,796,630	+		Atu2794	0.36	-0.6
2,797,008	-		Atu2794	0.84	-1.1
2,797,066	+				+0.4
2,797,066	+				-0.4
2,797,208	+				-0.4
2,797,700	+		Atu2795	0.45	-0.8
2,797,751	+		Atu2795	0.49	-0.5
2,797,772	+		Atu2795	0.51	-1.5
2,797,772	+		Atu2795	0.51	-0.7
2,797,871	-		Atu2795	0.60	-1.8
2,797,980	+		Atu2795	0.70	-0.1
2,797,981	+		Atu2795	0.70	-0.9
2,797,988	-		Atu2795	0.70	+0.4
2,798,114	+		Atu2795	0.81	-1.2
2,798,114	+		Atu2795	0.81	-1.0