Strain Fitness in Agrobacterium fabrum C58 around Atu0721

Experiment: R2A with Nitrofurantoin 0.4 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nitrofurantoin 0.4 mg/mL
719,784	+				-1.2
719,854	+		Atu0720	0.17	-0.3
719,854	+		Atu0720	0.17	-0.4
719,861	+		Atu0720	0.18	-0.2
719,862	-		Atu0720	0.18	-0.7
719,869	-		Atu0720	0.19	-0.3
719,869	-		Atu0720	0.19	-0.1
720,013	+		Atu0720	0.41	-0.5
720,021	-		Atu0720	0.42	-0.2
720,056	-		Atu0720	0.48	-0.1
720,068	-		Atu0720	0.50	-0.0
720,294	+		Atu0720	0.84	-0.3
720,407	+				-0.4
720,515	-				-0.6
720,591	+				-0.2
720,604	-				-0.6
720,898	+		Atu0721	0.15	-1.2
720,898	+		Atu0721	0.15	-1.6
720,917	-		Atu0721	0.17	-0.2
720,930	-		Atu0721	0.18	-0.7
721,056	-		Atu0721	0.29	-0.9
721,190	+		Atu0721	0.42	-1.6
721,190	+		Atu0721	0.42	-0.9
721,198	-		Atu0721	0.42	-1.1
721,248	-		Atu0721	0.47	-0.8
721,333	+		Atu0721	0.54	+0.0
721,333	+		Atu0721	0.54	-1.9
721,336	-		Atu0721	0.55	-2.0
721,474	-		Atu0721	0.67	+0.2
721,526	+		Atu0721	0.72	-1.1
721,633	+		Atu0721	0.81	-0.9
721,657	+		Atu0721	0.84	-0.7
721,694	-		Atu0721	0.87	-1.1
721,694	-		Atu0721	0.87	-0.5
721,696	-		Atu0721	0.87	-1.1
721,733	-				-0.5
721,842	-				+0.0
721,855	-				-1.5
721,855	-				-0.5
721,855	-				-1.3
721,939	-				-1.3
722,107	+				+0.6
722,124	-				-1.0
722,173	-				-0.4
722,253	+		Atu0722	0.15	-0.0
722,396	-		Atu0722	0.43	-0.2
722,424	+		Atu0722	0.48	+0.6
722,539	-		Atu0722	0.70	-0.4
722,616	-		Atu0722	0.85	-0.1
722,616	-		Atu0722	0.85	+1.1
722,666	+				-0.9
722,666	+				-0.3
722,667	+				-0.3
722,674	-				+0.2
722,674	-				-0.0