Strain Fitness in Ralstonia solanacearum PSI07 around RPSI07_RS04725

Experiment: water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
1,278,250	-				-0.3
1,278,323	-				-0.6
1,278,377	+				+0.1
1,278,428	+				+0.3
1,278,428	+				+0.4
1,278,429	-				+0.8
1,278,429	-				-0.1
1,278,429	-				-0.6
1,278,445	+				-0.3
1,278,454	+				-0.1
1,278,460	-				+3.7
1,278,475	-				-0.6
1,278,475	-				+0.6
1,278,477	-				+0.0
1,278,477	-				+0.2
1,278,519	-				+0.1
1,278,565	-				-0.3
1,278,689	+				-0.4
1,278,689	+				-2.9
1,278,699	+				-1.7
1,278,699	+				+0.7
1,278,701	+				-0.7
1,278,736	-				-0.1
1,278,738	+				+0.2
1,278,738	+				-1.9
1,278,738	+				-1.3
1,278,738	+				+0.0
1,278,739	-				-1.1
1,278,754	-				+2.2
1,278,777	+				+0.5
1,278,778	-				+0.7
1,278,778	-				-2.2
1,278,784	+				-1.4
1,278,785	-				-0.2
1,278,785	-				-0.0
1,278,785	-				+0.5
1,278,785	-				+1.2
1,278,785	-				-0.1
1,278,886	+				+0.8
1,278,920	+				+2.7
1,278,943	+				+0.7
1,278,944	-				-0.1
1,278,951	+				-0.4
1,278,999	+				-0.6
1,279,036	-				+0.4
1,279,111	-				-0.9
1,279,111	-				-0.9
1,279,114	-				-0.6
1,279,160	+				-0.0
1,279,236	+				-0.4
1,279,237	-				+1.0
1,279,239	-				+1.1
1,279,259	+				-0.4
1,279,259	+				+0.4
1,279,260	-				+0.7
1,279,277	+				+0.9
1,279,278	-				+2.5
1,279,301	+				+1.2
1,279,301	+				+0.1
1,279,301	+				+1.5
1,279,328	+		RPSI07_RS04725	0.10	+1.8
1,279,328	+		RPSI07_RS04725	0.10	+1.7
1,279,329	-		RPSI07_RS04725	0.10	+0.0
1,279,416	+		RPSI07_RS04725	0.15	+0.3
1,279,416	+		RPSI07_RS04725	0.15	-3.5
1,279,417	-		RPSI07_RS04725	0.15	-0.7
1,279,460	+		RPSI07_RS04725	0.17	-0.9
1,279,461	-		RPSI07_RS04725	0.17	+3.7
1,279,461	-		RPSI07_RS04725	0.17	+0.7
1,279,466	+		RPSI07_RS04725	0.17	-0.9
1,279,466	+		RPSI07_RS04725	0.17	-0.3
1,279,466	+		RPSI07_RS04725	0.17	+2.7
1,279,466	+		RPSI07_RS04725	0.17	-0.2
1,279,466	+		RPSI07_RS04725	0.17	+2.2
1,279,467	-		RPSI07_RS04725	0.17	+1.0
1,279,467	-		RPSI07_RS04725	0.17	-0.9
1,279,467	-		RPSI07_RS04725	0.17	+0.0
1,279,514	+		RPSI07_RS04725	0.20	-0.3
1,279,514	+		RPSI07_RS04725	0.20	-0.3
1,279,515	-		RPSI07_RS04725	0.20	+1.2
1,279,515	-		RPSI07_RS04725	0.20	-0.6
1,279,515	-		RPSI07_RS04725	0.20	+0.1
1,279,551	-		RPSI07_RS04725	0.22	+0.7
1,279,579	+		RPSI07_RS04725	0.23	+0.1
1,279,580	+		RPSI07_RS04725	0.23	+0.8
1,279,580	+		RPSI07_RS04725	0.23	-0.9
1,279,580	+		RPSI07_RS04725	0.23	-1.1
1,279,580	+		RPSI07_RS04725	0.23	+0.2
1,279,580	+		RPSI07_RS04725	0.23	-0.5
1,279,581	-		RPSI07_RS04725	0.24	+1.7
1,279,581	-		RPSI07_RS04725	0.24	+1.8
1,279,581	-		RPSI07_RS04725	0.24	-0.1
1,279,581	-		RPSI07_RS04725	0.24	+1.4
1,279,581	-		RPSI07_RS04725	0.24	-1.0
1,279,581	-		RPSI07_RS04725	0.24	+1.7
1,279,586	+		RPSI07_RS04725	0.24	+1.1
1,279,586	+		RPSI07_RS04725	0.24	-0.7
1,279,587	-		RPSI07_RS04725	0.24	-0.9
1,279,612	-		RPSI07_RS04725	0.25	+0.7
1,279,633	+		RPSI07_RS04725	0.26	+0.2
1,279,648	-		RPSI07_RS04725	0.27	-0.0
1,279,649	+		RPSI07_RS04725	0.27	-0.2
1,279,650	-		RPSI07_RS04725	0.27	+0.1
1,279,650	-		RPSI07_RS04725	0.27	-0.2
1,279,650	-		RPSI07_RS04725	0.27	-1.3
1,279,651	-		RPSI07_RS04725	0.27	-0.3
1,279,655	+		RPSI07_RS04725	0.28	-0.2
1,279,655	+		RPSI07_RS04725	0.28	-1.9
1,279,655	+		RPSI07_RS04725	0.28	+0.7
1,279,655	+		RPSI07_RS04725	0.28	+0.2
1,279,655	+		RPSI07_RS04725	0.28	+0.4
1,279,655	+		RPSI07_RS04725	0.28	-0.9
1,279,656	-		RPSI07_RS04725	0.28	+0.5
1,279,656	-		RPSI07_RS04725	0.28	-2.7
1,279,656	-		RPSI07_RS04725	0.28	-2.2
1,279,656	-		RPSI07_RS04725	0.28	-0.2
1,279,656	-		RPSI07_RS04725	0.28	-0.5
1,279,656	-		RPSI07_RS04725	0.28	+1.7
1,279,656	-		RPSI07_RS04725	0.28	-1.3
1,279,709	+		RPSI07_RS04725	0.30	+0.1
1,279,709	+		RPSI07_RS04725	0.30	-0.8
1,279,709	+		RPSI07_RS04725	0.30	-0.7
1,279,709	+		RPSI07_RS04725	0.30	+0.7
1,279,709	+		RPSI07_RS04725	0.30	-1.2
1,279,710	-		RPSI07_RS04725	0.30	-1.3
1,279,710	-		RPSI07_RS04725	0.30	+1.3
1,279,710	-		RPSI07_RS04725	0.30	-1.5
1,279,715	+		RPSI07_RS04725	0.31	+0.7
1,279,715	+		RPSI07_RS04725	0.31	-0.0
1,279,715	+		RPSI07_RS04725	0.31	-0.2
1,279,715	+		RPSI07_RS04725	0.31	+0.4
1,279,715	+		RPSI07_RS04725	0.31	-1.0
1,279,715	+		RPSI07_RS04725	0.31	+0.7
1,279,715	+		RPSI07_RS04725	0.31	-1.8
1,279,715	+		RPSI07_RS04725	0.31	-1.2
1,279,715	+		RPSI07_RS04725	0.31	+0.7
1,279,715	+		RPSI07_RS04725	0.31	+0.1
1,279,716	-		RPSI07_RS04725	0.31	-0.3
1,279,716	-		RPSI07_RS04725	0.31	-0.9
1,279,716	-		RPSI07_RS04725	0.31	-0.3
1,279,716	-		RPSI07_RS04725	0.31	-0.3
1,279,716	-		RPSI07_RS04725	0.31	-0.7
1,279,757	+		RPSI07_RS04725	0.33	-0.1
1,279,757	+		RPSI07_RS04725	0.33	-0.6
1,279,757	+		RPSI07_RS04725	0.33	-0.8
1,279,757	+		RPSI07_RS04725	0.33	+0.3
1,279,757	+		RPSI07_RS04725	0.33	+0.3
1,279,757	+		RPSI07_RS04725	0.33	+0.2
1,279,758	-		RPSI07_RS04725	0.33	-0.6
1,279,758	-		RPSI07_RS04725	0.33	+1.0
1,279,758	-		RPSI07_RS04725	0.33	-0.9
1,279,758	-		RPSI07_RS04725	0.33	+0.4
1,279,758	-		RPSI07_RS04725	0.33	+2.2
1,279,758	-		RPSI07_RS04725	0.33	+0.3
1,279,758	-		RPSI07_RS04725	0.33	+0.7
1,279,758	-		RPSI07_RS04725	0.33	-0.7
1,279,829	+		RPSI07_RS04725	0.37	+0.7
1,279,829	+		RPSI07_RS04725	0.37	+0.1
1,279,829	+		RPSI07_RS04725	0.37	+0.7
1,279,829	+		RPSI07_RS04725	0.37	-1.0
1,279,830	-		RPSI07_RS04725	0.37	-0.9
1,279,877	+		RPSI07_RS04725	0.39	-0.3
1,279,877	+		RPSI07_RS04725	0.39	+1.1
1,279,877	+		RPSI07_RS04725	0.39	-0.1
1,279,878	-		RPSI07_RS04725	0.39	-0.6
1,279,878	-		RPSI07_RS04725	0.39	+0.7
1,279,878	-		RPSI07_RS04725	0.39	+0.7
1,279,878	-		RPSI07_RS04725	0.39	-0.0
1,279,878	-		RPSI07_RS04725	0.39	+0.9
1,279,878	-		RPSI07_RS04725	0.39	-0.5
1,279,883	+		RPSI07_RS04725	0.40	+3.0
1,279,883	+		RPSI07_RS04725	0.40	+0.1
1,279,883	+		RPSI07_RS04725	0.40	-2.3
1,279,883	+		RPSI07_RS04725	0.40	+1.2
1,279,883	+		RPSI07_RS04725	0.40	+0.7
1,279,883	+		RPSI07_RS04725	0.40	+0.5
1,279,884	-		RPSI07_RS04725	0.40	+1.2
1,279,884	-		RPSI07_RS04725	0.40	+0.9
1,279,884	-		RPSI07_RS04725	0.40	-0.2
1,279,884	-		RPSI07_RS04725	0.40	+0.7
1,279,884	-				+0.7
1,279,884	-		RPSI07_RS04725	0.40	+1.4
1,279,884	-		RPSI07_RS04725	0.40	-0.8
1,279,911	-		RPSI07_RS04725	0.41	-1.2
1,279,911	-		RPSI07_RS04725	0.41	-0.6
1,279,911	-		RPSI07_RS04725	0.41	+0.3
1,279,911	-		RPSI07_RS04725	0.41	+2.2
1,279,937	+		RPSI07_RS04725	0.43	-2.2
1,279,938	-		RPSI07_RS04725	0.43	+0.3
1,279,992	+		RPSI07_RS04725	0.46	+1.7
1,280,006	+		RPSI07_RS04725	0.46	+0.1
1,280,006	+		RPSI07_RS04725	0.46	+0.1
1,280,007	-		RPSI07_RS04725	0.46	+0.0
1,280,007	-		RPSI07_RS04725	0.46	-2.4
1,280,033	+		RPSI07_RS04725	0.48	-1.7
1,280,033	+		RPSI07_RS04725	0.48	-0.5
1,280,033	+		RPSI07_RS04725	0.48	+0.9
1,280,033	+		RPSI07_RS04725	0.48	-0.8
1,280,034	-		RPSI07_RS04725	0.48	+0.6
1,280,034	-		RPSI07_RS04725	0.48	+0.7
1,280,133	+		RPSI07_RS04725	0.53	+0.7
1,280,133	+		RPSI07_RS04725	0.53	-0.5
1,280,133	+		RPSI07_RS04725	0.53	-0.1
1,280,133	+		RPSI07_RS04725	0.53	+0.5
1,280,133	+		RPSI07_RS04725	0.53	+0.3
1,280,133	+		RPSI07_RS04725	0.53	-2.3
1,280,134	-		RPSI07_RS04725	0.53	+0.7
1,280,135	+		RPSI07_RS04725	0.53	+0.1
1,280,135	+		RPSI07_RS04725	0.53	-0.1
1,280,135	+		RPSI07_RS04725	0.53	-1.4
1,280,135	+		RPSI07_RS04725	0.53	-0.7
1,280,136	-		RPSI07_RS04725	0.53	+0.5
1,280,136	-		RPSI07_RS04725	0.53	+0.3
1,280,136	-		RPSI07_RS04725	0.53	-0.2
1,280,136	-		RPSI07_RS04725	0.53	+0.4
1,280,186	+		RPSI07_RS04725	0.56	-1.7
1,280,186	+		RPSI07_RS04725	0.56	+0.0
1,280,264	+		RPSI07_RS04725	0.60	+0.5
1,280,264	+		RPSI07_RS04725	0.60	+0.3
1,280,264	+		RPSI07_RS04725	0.60	+1.4
1,280,264	+		RPSI07_RS04725	0.60	-2.0
1,280,264	+		RPSI07_RS04725	0.60	+1.7
1,280,264	+		RPSI07_RS04725	0.60	-0.7
1,280,264	+		RPSI07_RS04725	0.60	+0.3
1,280,264	+		RPSI07_RS04725	0.60	+1.8
1,280,264	+		RPSI07_RS04725	0.60	-0.1
1,280,265	-		RPSI07_RS04725	0.60	+2.0
1,280,265	-		RPSI07_RS04725	0.60	-0.6
1,280,265	-		RPSI07_RS04725	0.60	-1.0
1,280,265	-		RPSI07_RS04725	0.60	+0.5
1,280,270	+		RPSI07_RS04725	0.60	+0.3
1,280,294	+		RPSI07_RS04725	0.62	-1.6
1,280,294	+		RPSI07_RS04725	0.62	+0.3
1,280,294	+		RPSI07_RS04725	0.62	+1.2
1,280,345	+		RPSI07_RS04725	0.64	+0.5
1,280,345	+		RPSI07_RS04725	0.64	-0.8
1,280,345	+		RPSI07_RS04725	0.64	-3.7
1,280,345	+		RPSI07_RS04725	0.64	-0.3
1,280,346	-		RPSI07_RS04725	0.64	+0.7
1,280,385	+		RPSI07_RS04725	0.67	-0.8
1,280,385	+		RPSI07_RS04725	0.67	+0.1
1,280,386	-		RPSI07_RS04725	0.67	-1.4
1,280,386	-		RPSI07_RS04725	0.67	+0.7
1,280,401	+		RPSI07_RS04725	0.67	-0.8
1,280,424	-		RPSI07_RS04725	0.69	-0.5
1,280,458	-		RPSI07_RS04725	0.70	+1.0
1,280,507	+		RPSI07_RS04725	0.73	+0.1
1,280,507	+		RPSI07_RS04725	0.73	-1.0
1,280,537	+		RPSI07_RS04725	0.75	-0.2
1,280,537	+		RPSI07_RS04725	0.75	+1.2
1,280,537	+		RPSI07_RS04725	0.75	-0.5
1,280,537	+		RPSI07_RS04725	0.75	+0.6
1,280,537	+		RPSI07_RS04725	0.75	+1.9
1,280,538	-		RPSI07_RS04725	0.75	-0.7
1,280,538	-		RPSI07_RS04725	0.75	-1.5
1,280,538	-		RPSI07_RS04725	0.75	+0.1
1,280,570	+		RPSI07_RS04725	0.76	-0.8
1,280,570	+		RPSI07_RS04725	0.76	+0.2
1,280,576	+		RPSI07_RS04725	0.77	+0.1
1,280,576	+		RPSI07_RS04725	0.77	+0.2
1,280,576	+		RPSI07_RS04725	0.77	+0.2
1,280,576	+		RPSI07_RS04725	0.77	+0.5
1,280,576	+		RPSI07_RS04725	0.77	+1.4
1,280,576	+		RPSI07_RS04725	0.77	+1.7
1,280,577	-		RPSI07_RS04725	0.77	-0.3
1,280,577	-		RPSI07_RS04725	0.77	-0.3
1,280,577	-		RPSI07_RS04725	0.77	-0.8
1,280,577	-		RPSI07_RS04725	0.77	-0.8
1,280,633	+		RPSI07_RS04725	0.80	+0.2
1,280,633	+		RPSI07_RS04725	0.80	-0.5
1,280,633	+		RPSI07_RS04725	0.80	+0.5
1,280,633	+		RPSI07_RS04725	0.80	-0.7
1,280,633	+		RPSI07_RS04725	0.80	-0.2
1,280,634	-		RPSI07_RS04725	0.80	-0.1
1,280,634	-		RPSI07_RS04725	0.80	+2.7
1,280,634	-		RPSI07_RS04725	0.80	-0.6
1,280,634	-		RPSI07_RS04725	0.80	-0.1
1,280,637	+		RPSI07_RS04725	0.80	+0.7
1,280,637	+		RPSI07_RS04725	0.80	+0.9
1,280,637	+		RPSI07_RS04725	0.80	+0.4
1,280,637	+		RPSI07_RS04725	0.80	+1.7
1,280,637	+		RPSI07_RS04725	0.80	-1.6
1,280,637	+		RPSI07_RS04725	0.80	+0.7
1,280,637	+		RPSI07_RS04725	0.80	-0.3
1,280,637	+		RPSI07_RS04725	0.80	-1.3
1,280,679	+		RPSI07_RS04725	0.82	+0.7
1,280,679	+		RPSI07_RS04725	0.82	-0.3
1,280,680	-		RPSI07_RS04725	0.82	+0.3
1,280,680	-		RPSI07_RS04725	0.82	+0.2
1,280,697	+		RPSI07_RS04725	0.83	+0.7
1,280,698	-		RPSI07_RS04725	0.83	+0.7
1,280,698	-		RPSI07_RS04725	0.83	+0.4
1,280,702	+		RPSI07_RS04725	0.84	+3.7
1,280,702	+		RPSI07_RS04725	0.84	-1.3
1,280,702	+		RPSI07_RS04725	0.84	+0.5
1,280,702	+		RPSI07_RS04725	0.84	-0.5
1,280,702	+		RPSI07_RS04725	0.84	-1.2
1,280,702	+		RPSI07_RS04725	0.84	-1.2
1,280,702	+		RPSI07_RS04725	0.84	+0.0
1,280,702	+		RPSI07_RS04725	0.84	-0.6
1,280,703	-		RPSI07_RS04725	0.84	-2.3
1,280,703	-		RPSI07_RS04725	0.84	+0.7
1,280,713	+		RPSI07_RS04725	0.84	+0.7
1,280,713	+		RPSI07_RS04725	0.84	+0.4
1,280,713	+		RPSI07_RS04725	0.84	+1.8
1,280,759	+		RPSI07_RS04725	0.87	+0.4
1,280,759	+		RPSI07_RS04725	0.87	-0.0
1,280,759	+		RPSI07_RS04725	0.87	+0.7
1,280,760	-		RPSI07_RS04725	0.87	-0.8
1,280,840	+				-1.5
1,280,840	+				+0.1
1,280,840	+				-0.2
1,280,840	+				-0.6
1,280,841	-				-1.5
1,280,841	-				+0.4
1,280,884	-				+0.4
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1,281,205	-				-2.1
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