Strain Fitness in Agrobacterium fabrum C58 around Atu5010

Experiment: R2A with Ceftazidime 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Ceftazidime 4 mM
11,685	+				+0.3
11,700	-				-0.2
11,751	-				+1.6
11,832	-				-0.5
11,832	-				-0.2
11,842	+				-0.2
11,843	+				-0.1
11,850	-				+0.2
11,869	-				+0.3
11,935	+				-0.2
12,024	+				+0.3
12,025	+				+0.1
12,047	+				+0.1
12,055	-				-0.5
12,055	-				+1.0
12,055	-				+0.3
12,055	-				-1.0
12,055	-				+0.4
12,060	-				+1.2
12,241	-				+0.4
12,248	+				-0.3
12,263	+				+0.1
12,306	+				+0.2
12,404	-				+0.2
12,434	+				+1.0
12,496	+				-0.3
12,515	-				+0.2
12,591	-		Atu5010	0.37	-1.0
12,637	+		Atu5010	0.60	-0.8
12,682	+		Atu5010	0.82	-0.4
12,682	+		Atu5010	0.82	+0.2
12,746	+				-1.1
12,827	+				+0.2
12,827	+				+0.4
12,835	-				-0.3
12,932	-				-0.1
12,980	-				+1.5
13,116	+				+0.6
13,175	+		Atu5011	0.14	+0.4
13,207	-		Atu5011	0.19	+0.7
13,224	+		Atu5011	0.22	+1.3
13,280	+		Atu5011	0.31	-0.1
13,390	+		Atu5011	0.48	+0.0
13,569	-		Atu5011	0.76	+0.3
13,569	-		Atu5011	0.76	-0.7
13,574	+		Atu5011	0.77	-0.1
13,619	-		Atu5011	0.84	-0.0