Strain Fitness in Agrobacterium fabrum C58 around Atu1177

Experiment: R2A with Ceftazidime 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Ceftazidime 4 mM
1,170,118	-				+0.2
1,170,406	+		Atu1176	0.23	+0.3
1,170,559	+		Atu1176	0.51	+0.3
1,170,645	+		Atu1176	0.67	+0.3
1,170,663	-		Atu1176	0.71	+1.7
1,170,680	+		Atu1176	0.74	-0.3
1,170,680	+		Atu1176	0.74	-0.5
1,170,767	+				-0.2
1,170,768	+				-0.1
1,170,776	-				-0.3
1,170,812	-				+0.2
1,170,824	-				+0.8
1,171,042	-		Atu1177	0.37	+1.2
1,171,070	-		Atu1177	0.42	+1.3
1,171,077	+		Atu1177	0.44	+1.6
1,171,192	+		Atu1177	0.64	-0.1
1,171,201	+		Atu1177	0.66	+0.5
1,171,282	+		Atu1177	0.80	+1.3
1,171,290	-		Atu1177	0.81	+0.6
1,171,398	+				+0.8