Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3090

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
3,690,162	-		Echvi_3089	0.30	-0.4
3,690,174	+		Echvi_3089	0.31	+0.4
3,690,174	+		Echvi_3089	0.31	+0.6
3,690,174	+		Echvi_3089	0.31	-0.3
3,690,174	+		Echvi_3089	0.31	+0.3
3,690,175	-		Echvi_3089	0.31	-1.2
3,690,175	-		Echvi_3089	0.31	+0.1
3,690,175	-		Echvi_3089	0.31	+0.2
3,690,176	+		Echvi_3089	0.31	+0.7
3,690,220	-		Echvi_3089	0.34	-0.1
3,690,283	+		Echvi_3089	0.39	-0.6
3,690,317	-		Echvi_3089	0.41	-0.3
3,690,355	-		Echvi_3089	0.44	+0.1
3,690,408	+		Echvi_3089	0.47	+0.5
3,690,477	+		Echvi_3089	0.52	-0.6
3,690,477	+		Echvi_3089	0.52	-0.2
3,690,478	-		Echvi_3089	0.52	-1.0
3,690,539	-		Echvi_3089	0.56	-0.2
3,690,593	+		Echvi_3089	0.60	+0.4
3,690,593	+		Echvi_3089	0.60	-0.2
3,690,593	+		Echvi_3089	0.60	-1.6
3,690,649	+		Echvi_3089	0.64	+0.6
3,690,650	-		Echvi_3089	0.64	-0.7
3,690,677	-		Echvi_3089	0.66	-0.7
3,690,843	+		Echvi_3089	0.78	-0.5
3,690,850	+		Echvi_3089	0.78	+0.6
3,690,850	+		Echvi_3089	0.78	-1.1
3,690,854	+		Echvi_3089	0.78	+0.1
3,690,933	-		Echvi_3089	0.84	+0.2
3,690,933	-		Echvi_3089	0.84	-0.4
3,691,014	-		Echvi_3089	0.90	-0.3
3,691,081	+				+0.3
3,691,081	+				+0.4
3,691,082	-				-0.2
3,691,082	-				-0.8
3,691,146	-				-0.0
3,691,146	-				+0.6
3,691,161	-				-0.7
3,691,161	-				-1.2
3,691,188	+				-1.0
3,691,188	+				-0.8
3,691,188	+				+0.4
3,691,192	+				+0.0
3,691,192	+				+0.1
3,691,192	+				+0.8
3,691,193	-				-2.6
3,691,193	-				+0.1
3,691,287	+		Echvi_3090	0.10	+0.5
3,691,287	+		Echvi_3090	0.10	-1.3
3,691,287	+		Echvi_3090	0.10	+1.0
3,691,288	-		Echvi_3090	0.10	-0.2
3,691,288	-		Echvi_3090	0.10	-1.1
3,691,289	+		Echvi_3090	0.10	+0.6
3,691,289	+		Echvi_3090	0.10	-1.1
3,691,289	+		Echvi_3090	0.10	-0.0
3,691,289	+		Echvi_3090	0.10	-0.7
3,691,290	-		Echvi_3090	0.11	-1.3
3,691,290	-		Echvi_3090	0.11	-0.8
3,691,290	-		Echvi_3090	0.11	-0.7
3,691,290	-		Echvi_3090	0.11	-0.1
3,691,290	-		Echvi_3090	0.11	-0.6
3,691,318	-		Echvi_3090	0.13	+0.1
3,691,318	-		Echvi_3090	0.13	-0.4
3,691,321	+		Echvi_3090	0.13	+0.6
3,691,321	+		Echvi_3090	0.13	+0.3
3,691,321	+		Echvi_3090	0.13	+0.6
3,691,322	-		Echvi_3090	0.13	-0.4
3,691,415	+		Echvi_3090	0.20	-0.0
3,691,442	+		Echvi_3090	0.22	-0.5
3,691,457	+		Echvi_3090	0.23	-0.0
3,691,457	+		Echvi_3090	0.23	-1.4
3,691,457	+		Echvi_3090	0.23	-0.0
3,691,457	+		Echvi_3090	0.23	-1.0
3,691,458	-		Echvi_3090	0.23	+0.7
3,691,493	+		Echvi_3090	0.25	+1.0
3,691,494	-		Echvi_3090	0.25	-0.8
3,691,545	+		Echvi_3090	0.29	+0.3
3,691,559	+		Echvi_3090	0.30	-0.5
3,691,559	+		Echvi_3090	0.30	-0.8
3,691,640	-		Echvi_3090	0.36	-1.3
3,691,640	-		Echvi_3090	0.36	-0.2
3,691,671	+		Echvi_3090	0.38	-0.4
3,691,704	-		Echvi_3090	0.41	+0.8
3,691,704	-		Echvi_3090	0.41	-0.2
3,691,899	+		Echvi_3090	0.55	-2.3
3,691,899	+		Echvi_3090	0.55	+0.4
3,691,944	+				-1.6
3,691,944	+		Echvi_3090	0.58	-0.6
3,691,944	+		Echvi_3090	0.58	-0.6
3,691,945	-		Echvi_3090	0.59	-1.2
3,691,946	+		Echvi_3090	0.59	-0.0
3,691,946	+		Echvi_3090	0.59	-0.7
3,691,947	-		Echvi_3090	0.59	+0.0
3,691,947	-		Echvi_3090	0.59	+0.6
3,691,947	-		Echvi_3090	0.59	-0.2
3,691,947	-		Echvi_3090	0.59	-0.2
3,691,947	-		Echvi_3090	0.59	-0.6
3,691,947	-		Echvi_3090	0.59	-0.4
3,691,950	-		Echvi_3090	0.59	+0.5
3,691,962	+		Echvi_3090	0.60	+0.2
3,691,963	-		Echvi_3090	0.60	+0.9
3,691,965	+		Echvi_3090	0.60	-0.0
3,691,965	+		Echvi_3090	0.60	-0.0
3,691,965	+		Echvi_3090	0.60	+0.5
3,692,017	-		Echvi_3090	0.64	-0.2
3,692,069	+		Echvi_3090	0.68	-1.3
3,692,093	-		Echvi_3090	0.69	-1.8
3,692,181	-		Echvi_3090	0.76	+0.6
3,692,181	-		Echvi_3090	0.76	-0.4
3,692,182	+		Echvi_3090	0.76	+0.3
3,692,182	+		Echvi_3090	0.76	+0.2
3,692,183	-		Echvi_3090	0.76	-0.1
3,692,187	+		Echvi_3090	0.76	-0.2
3,692,241	-		Echvi_3090	0.80	+0.3
3,692,241	-		Echvi_3090	0.80	-0.2
3,692,251	+		Echvi_3090	0.81	+0.4
3,692,430	-				-0.1
3,692,464	-				-0.6
3,692,465	+				-0.7
3,692,466	-				+0.3
3,692,481	+				-0.8
3,692,485	+				-0.4
3,692,485	+				-0.2
3,692,486	-				-0.0
3,692,489	+				-1.3
3,692,509	-				+0.2
3,692,524	-				-2.3
3,692,560	+				-1.5
3,692,560	+				+2.0
3,692,561	-				-0.6
3,692,561	-				+0.4
3,692,655	+				-0.9
3,692,655	+				-0.3
3,692,655	+				+0.8
3,692,656	-				-1.0
3,692,660	-				-0.1
3,692,660	-				-0.1
3,692,763	+				+1.1
3,692,764	-				+0.4
3,692,764	-				+0.1
3,692,764	-				-2.7
3,692,765	+				-0.1
3,692,765	+				-2.2
3,692,766	-				-0.3
3,692,863	+				+0.4
3,692,892	-				+0.5
3,692,892	-				+0.2
3,692,895	+				-1.1
3,692,896	-				+0.7
3,692,896	-				-0.2
3,692,896	-				-0.3
3,692,896	-				-0.4
3,692,955	-		Echvi_3091	0.16	+1.6
3,692,958	+		Echvi_3091	0.16	-0.6
3,692,958	+		Echvi_3091	0.16	-0.0
3,692,958	+		Echvi_3091	0.16	+0.6
3,692,958	+		Echvi_3091	0.16	+2.6
3,692,959	-		Echvi_3091	0.16	-0.0
3,692,959	-		Echvi_3091	0.16	-0.9
3,692,959	-		Echvi_3091	0.16	-0.2
3,692,959	-		Echvi_3091	0.16	-0.3
3,692,959	-		Echvi_3091	0.16	-0.3
3,692,964	-		Echvi_3091	0.16	-0.6
3,692,990	-		Echvi_3091	0.19	-0.1
3,693,139	+		Echvi_3091	0.34	-0.1
3,693,196	+		Echvi_3091	0.39	+1.0
3,693,196	+		Echvi_3091	0.39	-1.3
3,693,197	-		Echvi_3091	0.39	+1.2
3,693,288	+		Echvi_3091	0.48	-0.6
3,693,319	+		Echvi_3091	0.51	+0.3