Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1241

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,423,129	-		Echvi_1240	0.46	+0.2
1,423,134	+		Echvi_1240	0.46	-1.0
1,423,214	-		Echvi_1240	0.52	+0.9
1,423,264	+		Echvi_1240	0.56	+1.0
1,423,264	+		Echvi_1240	0.56	-0.0
1,423,265	-		Echvi_1240	0.56	+0.1
1,423,265	-		Echvi_1240	0.56	-0.4
1,423,323	-		Echvi_1240	0.61	+1.1
1,423,350	+		Echvi_1240	0.63	+0.5
1,423,350	+		Echvi_1240	0.63	-0.0
1,423,408	+		Echvi_1240	0.67	+0.5
1,423,408	+		Echvi_1240	0.67	+0.4
1,423,408	+		Echvi_1240	0.67	-0.1
1,423,408	+		Echvi_1240	0.67	-0.0
1,423,408	+		Echvi_1240	0.67	-0.2
1,423,409	-		Echvi_1240	0.67	+0.0
1,423,410	+		Echvi_1240	0.67	+0.7
1,423,410	+		Echvi_1240	0.67	-0.2
1,423,411	-		Echvi_1240	0.67	-0.9
1,423,411	-		Echvi_1240	0.67	-0.2
1,423,411	-		Echvi_1240	0.67	-0.7
1,423,411	-		Echvi_1240	0.67	-2.0
1,423,413	+		Echvi_1240	0.67	-0.3
1,423,413	+		Echvi_1240	0.67	-1.0
1,423,414	-		Echvi_1240	0.67	-1.4
1,423,414	-		Echvi_1240	0.67	-2.9
1,423,414	-		Echvi_1240	0.67	-0.5
1,423,438	+		Echvi_1240	0.69	-0.3
1,423,438	+		Echvi_1240	0.69	+0.3
1,423,439	-		Echvi_1240	0.69	+0.1
1,423,439	-		Echvi_1240	0.69	-2.9
1,423,439	-		Echvi_1240	0.69	-1.4
1,423,508	+		Echvi_1240	0.74	-0.3
1,423,509	-		Echvi_1240	0.74	-0.2
1,423,509	-		Echvi_1240	0.74	+0.2
1,423,586	-		Echvi_1240	0.80	-0.0
1,423,586	-		Echvi_1240	0.80	-0.4
1,423,613	+		Echvi_1240	0.82	+0.8
1,423,614	-		Echvi_1240	0.82	+1.1
1,423,665	+		Echvi_1240	0.86	-0.8
1,423,677	+		Echvi_1240	0.87	-0.1
1,423,677	+		Echvi_1240	0.87	-0.4
1,423,677	+		Echvi_1240	0.87	-0.0
1,423,738	-				+1.0
1,423,756	+				-0.2
1,423,757	-				-1.4
1,423,757	-				-0.4
1,423,789	-				-0.0
1,423,801	+				+1.2
1,423,802	-				-0.1
1,423,850	-				-1.9
1,423,859	+				+2.3
1,423,860	-				-1.0
1,423,866	+				-0.2
1,423,875	+				-0.6
1,423,876	-				-0.4
1,423,970	-				-0.8
1,424,023	+				-0.5
1,424,037	+				+0.2
1,424,046	+				+0.3
1,424,052	-				+0.0
1,424,138	+				-1.4
1,424,162	+		Echvi_1241	0.12	+0.4
1,424,199	+		Echvi_1241	0.20	-1.9
1,424,200	-		Echvi_1241	0.21	-0.6
1,424,228	+		Echvi_1241	0.27	+0.8
1,424,246	-		Echvi_1241	0.31	-0.2
1,424,288	+		Echvi_1241	0.40	+0.5
1,424,288	+		Echvi_1241	0.40	+0.2
1,424,288	+		Echvi_1241	0.40	-0.6
1,424,288	+		Echvi_1241	0.40	+0.1
1,424,289	-		Echvi_1241	0.40	-0.1
1,424,289	-		Echvi_1241	0.40	-1.4
1,424,289	-		Echvi_1241	0.40	+0.4
1,424,296	+		Echvi_1241	0.42	+0.1
1,424,296	+		Echvi_1241	0.42	+0.6
1,424,297	-		Echvi_1241	0.42	+0.4
1,424,305	-		Echvi_1241	0.44	-0.8
1,424,355	+		Echvi_1241	0.55	-0.3
1,424,356	-		Echvi_1241	0.55	-0.1
1,424,367	+		Echvi_1241	0.58	+1.3
1,424,367	+		Echvi_1241	0.58	-0.6
1,424,367	+		Echvi_1241	0.58	-0.1
1,424,368	-		Echvi_1241	0.58	-0.4
1,424,395	+		Echvi_1241	0.64	-1.4
1,424,396	-		Echvi_1241	0.64	-0.7
1,424,476	+		Echvi_1241	0.82	-0.6
1,424,476	+		Echvi_1241	0.82	+0.4
1,424,477	-		Echvi_1241	0.83	+0.1
1,424,554	+				+0.8
1,424,555	-				-0.2
1,424,555	-				+0.3
1,424,581	-				+0.1
1,424,581	-				-0.4
1,424,636	+				+0.4
1,424,636	+				-0.9
1,424,637	-				-0.5
1,424,675	-				-0.0
1,424,675	-				-0.8
1,424,675	-				-1.0
1,424,675	-				-0.0
1,424,678	+				+1.0
1,424,678	+				+0.2
1,424,679	-				-0.4
1,424,679	-				-0.0
1,424,679	-				-1.0
1,424,679	-				+1.0
1,424,682	+				+1.0
1,424,682	+				-1.7
1,424,682	+				-0.6
1,424,682	+				+0.2
1,424,683	-				-2.4
1,424,683	-				+0.8
1,424,688	+				-0.8
1,424,689	-				-0.5
1,424,700	-				-0.4
1,424,728	-				+1.5
1,424,741	-				+0.1
1,424,741	-				-0.8
1,424,741	-				-1.6
1,424,744	+				-1.4
1,424,744	+				-0.9
1,424,744	+				+0.1
1,424,745	-				+1.0
1,424,745	-				+1.2
1,424,745	-				+0.2
1,424,745	-				-0.5
1,424,745	-				+1.0
1,424,750	+				-0.5
1,424,750	+				-0.1
1,424,751	-				-0.6
1,424,751	-				-0.0
1,424,751	-				-0.0
1,424,751	-				+0.5
1,424,771	-				-1.3
1,424,805	+				-2.4
1,424,806	-				-0.0
1,424,824	+				-0.2
1,424,824	+				-0.0
1,424,824	+				-0.2
1,424,825	-				-1.0
1,424,854	+				+0.3
1,424,854	+				+0.5
1,424,855	-				+1.0
1,424,855	-				+1.4
1,424,855	-				-0.5
1,424,858	+				+1.0
1,424,858	+				-1.3
1,424,868	+				+0.4
1,424,868	+				-0.3
1,424,868	+				+0.7
1,424,869	-				-1.0
1,424,869	-				-0.8
1,424,875	+				-0.8
1,424,876	-				+0.5
1,424,876	-				-2.0
1,424,876	-				+0.5
1,424,948	-				-0.5
1,424,978	-				-0.2
1,424,986	+				+0.0
1,425,089	-				-1.4
1,425,089	-				-0.9
1,425,091	+				+3.3
1,425,092	-				+1.1
1,425,092	-				-0.5
1,425,163	+				+0.4
1,425,164	-				-0.6
1,425,164	-				+0.0
1,425,164	-				+1.0
1,425,164	-				+0.4
1,425,203	+				-0.7
1,425,203	+				-0.0
1,425,210	+				-1.6
1,425,210	+				-2.0
1,425,211	-				+0.2
1,425,211	-				-0.0
1,425,211	-				+1.4
1,425,213	+				-0.2
1,425,213	+				-0.1
1,425,214	-				+0.6
1,425,216	+				-0.6
1,425,216	+				-2.2
1,425,269	+				+1.7
1,425,269	+				-0.0
1,425,269	+				-0.1
1,425,320	-		Echvi_1242	0.17	+0.0
1,425,325	+		Echvi_1242	0.18	+1.0
1,425,326	-		Echvi_1242	0.18	+1.5
1,425,326	-		Echvi_1242	0.18	+0.7
1,425,326	-		Echvi_1242	0.18	+0.7
1,425,326	-		Echvi_1242	0.18	+0.4
1,425,326	-		Echvi_1242	0.18	-0.1
1,425,340	-		Echvi_1242	0.20	-0.5
1,425,382	+		Echvi_1242	0.27	+0.9
1,425,382	+		Echvi_1242	0.27	-1.4
1,425,383	-		Echvi_1242	0.27	+0.5
1,425,399	-		Echvi_1242	0.30	-0.5
1,425,428	-		Echvi_1242	0.35	-0.9