Experiment: V2_1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS26695 and ABID97_RS26700 are separated by 95 nucleotides ABID97_RS26700 and ABID97_RS26705 overlap by 4 nucleotides ABID97_RS26705 and ABID97_RS26710 are separated by 91 nucleotides
ABID97_RS26695: ABID97_RS26695 - M81 family metallopeptidase, at 262,537 to 264,027
_RS26695
ABID97_RS26700: ABID97_RS26700 - Ku protein, at 264,123 to 265,064
_RS26700
ABID97_RS26705: ABID97_RS26705 - tetratricopeptide repeat protein, at 265,061 to 265,903
_RS26705
ABID97_RS26710: ABID97_RS26710 - Ku protein, at 265,995 to 266,933
_RS26710
Position (kb) 264
265
266 Strain fitness (log2 ratio) -1
0
1
2
3 at 263.134 kb on - strand, within ABID97_RS26695 at 263.340 kb on - strand, within ABID97_RS26695 at 263.815 kb on + strand, within ABID97_RS26695 at 263.815 kb on + strand, within ABID97_RS26695 at 263.849 kb on - strand at 264.267 kb on + strand, within ABID97_RS26700 at 264.267 kb on + strand, within ABID97_RS26700 at 264.268 kb on - strand, within ABID97_RS26700 at 264.447 kb on + strand, within ABID97_RS26700 at 264.448 kb on - strand, within ABID97_RS26700 at 264.462 kb on + strand, within ABID97_RS26700 at 264.465 kb on + strand, within ABID97_RS26700 at 264.466 kb on - strand, within ABID97_RS26700 at 264.466 kb on - strand, within ABID97_RS26700 at 264.499 kb on - strand, within ABID97_RS26700 at 264.739 kb on - strand, within ABID97_RS26700 at 265.605 kb on - strand, within ABID97_RS26705 at 265.665 kb on - strand, within ABID97_RS26705 at 265.709 kb on + strand, within ABID97_RS26705 at 265.710 kb on - strand, within ABID97_RS26705 at 265.767 kb on - strand, within ABID97_RS26705
Per-strain Table
Position Strand Gene LocusTag Fraction V2_1 remove 263,134 - ABID97_RS26695 0.40 -0.2 263,340 - ABID97_RS26695 0.54 +0.2 263,815 + ABID97_RS26695 0.86 -0.4 263,815 + ABID97_RS26695 0.86 -0.2 263,849 - +1.3 264,267 + ABID97_RS26700 0.15 -0.4 264,267 + ABID97_RS26700 0.15 +0.3 264,268 - ABID97_RS26700 0.15 +0.4 264,447 + ABID97_RS26700 0.34 +2.0 264,448 - ABID97_RS26700 0.35 +0.1 264,462 + ABID97_RS26700 0.36 +0.5 264,465 + ABID97_RS26700 0.36 -0.2 264,466 - ABID97_RS26700 0.36 -0.1 264,466 - ABID97_RS26700 0.36 -0.2 264,499 - ABID97_RS26700 0.40 +0.6 264,739 - ABID97_RS26700 0.65 +0.7 265,605 - ABID97_RS26705 0.65 +3.3 265,665 - ABID97_RS26705 0.72 +0.1 265,709 + ABID97_RS26705 0.77 -0.1 265,710 - ABID97_RS26705 0.77 +0.3 265,767 - ABID97_RS26705 0.84 -0.1
Or see this region's nucleotide sequence