Experiment: V2_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS07080 and ABID97_RS07085 are separated by 12 nucleotides ABID97_RS07085 and ABID97_RS07090 overlap by 14 nucleotides ABID97_RS07090 and ABID97_RS07095 are separated by 244 nucleotides
ABID97_RS07080: ABID97_RS07080 - ABC transporter ATP-binding protein, at 1,500,565 to 1,501,617
_RS07080
ABID97_RS07085: ABID97_RS07085 - HAD family phosphatase, at 1,501,630 to 1,502,271
_RS07085
ABID97_RS07090: ABID97_RS07090 - lipocalin family protein, at 1,502,258 to 1,502,935
_RS07090
ABID97_RS07095: ABID97_RS07095 - transaldolase, at 1,503,180 to 1,504,139
_RS07095
Position (kb) 1501
1502
1503 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1500.829 kb on + strand, within ABID97_RS07080 at 1500.829 kb on + strand, within ABID97_RS07080 at 1500.829 kb on + strand, within ABID97_RS07080 at 1500.829 kb on + strand, within ABID97_RS07080 at 1500.829 kb on + strand, within ABID97_RS07080 at 1500.829 kb on + strand, within ABID97_RS07080 at 1500.830 kb on - strand, within ABID97_RS07080 at 1500.830 kb on - strand, within ABID97_RS07080 at 1500.830 kb on - strand, within ABID97_RS07080 at 1501.144 kb on + strand, within ABID97_RS07080 at 1501.144 kb on + strand, within ABID97_RS07080 at 1501.145 kb on - strand, within ABID97_RS07080 at 1501.145 kb on - strand, within ABID97_RS07080 at 1501.468 kb on + strand, within ABID97_RS07080 at 1501.483 kb on + strand, within ABID97_RS07080 at 1501.484 kb on - strand, within ABID97_RS07080 at 1501.484 kb on - strand, within ABID97_RS07080 at 1501.489 kb on + strand, within ABID97_RS07080 at 1501.963 kb on + strand, within ABID97_RS07085 at 1501.964 kb on - strand, within ABID97_RS07085 at 1501.966 kb on + strand, within ABID97_RS07085 at 1502.089 kb on + strand, within ABID97_RS07085 at 1502.089 kb on + strand, within ABID97_RS07085 at 1502.090 kb on - strand, within ABID97_RS07085 at 1502.090 kb on - strand, within ABID97_RS07085 at 1502.090 kb on - strand, within ABID97_RS07085 at 1502.090 kb on - strand, within ABID97_RS07085 at 1502.259 kb on + strand at 1502.260 kb on - strand at 1502.373 kb on + strand, within ABID97_RS07090 at 1502.373 kb on + strand, within ABID97_RS07090 at 1502.373 kb on + strand, within ABID97_RS07090 at 1502.409 kb on + strand, within ABID97_RS07090 at 1502.436 kb on + strand, within ABID97_RS07090 at 1502.436 kb on + strand, within ABID97_RS07090 at 1502.619 kb on + strand, within ABID97_RS07090 at 1502.620 kb on - strand, within ABID97_RS07090 at 1502.697 kb on + strand, within ABID97_RS07090 at 1502.697 kb on + strand, within ABID97_RS07090 at 1502.697 kb on + strand, within ABID97_RS07090 at 1502.698 kb on - strand, within ABID97_RS07090 at 1503.034 kb on + strand at 1503.034 kb on + strand at 1503.103 kb on - strand at 1503.103 kb on - strand at 1503.169 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction V2_100 remove 1,500,829 + ABID97_RS07080 0.25 -2.3 1,500,829 + ABID97_RS07080 0.25 -0.6 1,500,829 + ABID97_RS07080 0.25 -0.9 1,500,829 + ABID97_RS07080 0.25 -0.1 1,500,829 + ABID97_RS07080 0.25 +0.1 1,500,829 + ABID97_RS07080 0.25 +0.1 1,500,830 - ABID97_RS07080 0.25 +0.0 1,500,830 - ABID97_RS07080 0.25 -0.6 1,500,830 - ABID97_RS07080 0.25 +0.9 1,501,144 + ABID97_RS07080 0.55 +0.6 1,501,144 + ABID97_RS07080 0.55 +1.0 1,501,145 - ABID97_RS07080 0.55 +0.3 1,501,145 - ABID97_RS07080 0.55 -0.4 1,501,468 + ABID97_RS07080 0.86 -0.0 1,501,483 + ABID97_RS07080 0.87 +1.2 1,501,484 - ABID97_RS07080 0.87 -0.1 1,501,484 - ABID97_RS07080 0.87 +1.3 1,501,489 + ABID97_RS07080 0.88 +0.7 1,501,963 + ABID97_RS07085 0.52 +1.1 1,501,964 - ABID97_RS07085 0.52 -1.0 1,501,966 + ABID97_RS07085 0.52 +1.0 1,502,089 + ABID97_RS07085 0.71 -2.6 1,502,089 + ABID97_RS07085 0.71 -0.1 1,502,090 - ABID97_RS07085 0.72 -1.2 1,502,090 - ABID97_RS07085 0.72 -0.8 1,502,090 - ABID97_RS07085 0.72 -1.8 1,502,090 - ABID97_RS07085 0.72 -2.8 1,502,259 + -0.6 1,502,260 - -0.7 1,502,373 + ABID97_RS07090 0.17 +0.3 1,502,373 + ABID97_RS07090 0.17 -0.8 1,502,373 + ABID97_RS07090 0.17 -0.2 1,502,409 + ABID97_RS07090 0.22 +0.5 1,502,436 + ABID97_RS07090 0.26 +2.2 1,502,436 + ABID97_RS07090 0.26 -0.6 1,502,619 + ABID97_RS07090 0.53 -0.7 1,502,620 - ABID97_RS07090 0.53 -0.0 1,502,697 + ABID97_RS07090 0.65 -0.6 1,502,697 + ABID97_RS07090 0.65 +1.4 1,502,697 + ABID97_RS07090 0.65 +2.4 1,502,698 - ABID97_RS07090 0.65 -0.9 1,503,034 + -1.3 1,503,034 + +0.4 1,503,103 - +0.9 1,503,103 - -0.1 1,503,169 + -3.3
Or see this region's nucleotide sequence