Experiment: V2_100
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02290 and ABID97_RS02295 are separated by 15 nucleotides ABID97_RS02295 and ABID97_RS02300 are separated by 8 nucleotides ABID97_RS02300 and ABID97_RS02305 are separated by 2 nucleotides
ABID97_RS02290: ABID97_RS02290 - sensor histidine kinase N-terminal domain-containing protein, at 461,531 to 462,976
_RS02290
ABID97_RS02295: ABID97_RS02295 - sporulation protein, at 462,992 to 463,198
_RS02295
ABID97_RS02300: ABID97_RS02300 - biotin--[acetyl-CoA-carboxylase] ligase, at 463,207 to 464,028
_RS02300
ABID97_RS02305: ABID97_RS02305 - SET domain-containing protein-lysine N-methyltransferase, at 464,031 to 464,651
_RS02305
Position (kb) 462
463
464 Strain fitness (log2 ratio) -2
-1
0
1 at 462.563 kb on + strand, within ABID97_RS02290 at 462.662 kb on + strand, within ABID97_RS02290 at 462.662 kb on + strand, within ABID97_RS02290 at 462.662 kb on + strand, within ABID97_RS02290 at 462.663 kb on - strand, within ABID97_RS02290 at 462.663 kb on - strand, within ABID97_RS02290 at 462.663 kb on - strand, within ABID97_RS02290 at 462.806 kb on + strand, within ABID97_RS02290 at 462.806 kb on + strand, within ABID97_RS02290 at 462.807 kb on - strand, within ABID97_RS02290 at 462.807 kb on - strand, within ABID97_RS02290 at 462.807 kb on - strand, within ABID97_RS02290 at 463.150 kb on - strand, within ABID97_RS02295
Per-strain Table
Position Strand Gene LocusTag Fraction V2_100 remove 462,563 + ABID97_RS02290 0.71 -1.0 462,662 + ABID97_RS02290 0.78 +0.1 462,662 + ABID97_RS02290 0.78 -1.3 462,662 + ABID97_RS02290 0.78 -1.1 462,663 - ABID97_RS02290 0.78 -0.1 462,663 - ABID97_RS02290 0.78 -0.8 462,663 - ABID97_RS02290 0.78 -1.4 462,806 + ABID97_RS02290 0.88 -0.0 462,806 + ABID97_RS02290 0.88 -1.8 462,807 - ABID97_RS02290 0.88 -1.0 462,807 - ABID97_RS02290 0.88 -1.2 462,807 - ABID97_RS02290 0.88 +0.5 463,150 - ABID97_RS02295 0.76 +0.5
Or see this region's nucleotide sequence