Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2042

Experiment: Cola_ML5_MIT diversity barseq

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cola_ML5_MIT diversity barseq
2,408,468	-		Echvi_2040	0.61	+0.5
2,408,566	+		Echvi_2040	0.69	+0.6
2,408,618	+		Echvi_2040	0.73	-0.5
2,408,618	+		Echvi_2040	0.73	+0.7
2,408,620	+		Echvi_2040	0.73	-0.8
2,408,621	-		Echvi_2040	0.73	-0.4
2,408,621	-		Echvi_2040	0.73	+0.1
2,408,621	-		Echvi_2040	0.73	-0.8
2,408,621	-		Echvi_2040	0.73	+0.1
2,408,780	+		Echvi_2040	0.85	+0.6
2,408,781	-		Echvi_2040	0.85	-0.3
2,408,781	-		Echvi_2040	0.85	-1.5
2,408,806	-		Echvi_2040	0.87	-0.4
2,408,808	-		Echvi_2040	0.87	+0.7
2,408,957	-				-1.3
2,408,965	-				-0.0
2,408,983	-				-0.4
2,409,062	-				-1.6
2,409,064	-				+0.1
2,409,064	-				+0.3
2,409,108	+				-0.3
2,409,108	+				+0.1
2,409,108	+				-0.1
2,409,110	+				+0.0
2,409,279	-				-0.6
2,409,364	-				-1.6
2,409,382	+				+0.1
2,409,382	+				+0.7
2,409,383	-				-1.8
2,409,383	-				-0.1
2,409,383	-				-0.1
2,409,487	-				-0.0
2,409,487	-				-0.9
2,409,590	+		Echvi_2042	0.12	-0.3
2,409,590	+		Echvi_2042	0.12	-0.4
2,409,591	-		Echvi_2042	0.12	+2.1
2,409,591	-		Echvi_2042	0.12	+0.4
2,409,650	+		Echvi_2042	0.17	+0.2
2,409,728	-		Echvi_2042	0.23	-0.1
2,409,731	-		Echvi_2042	0.24	-0.8
2,409,731	-		Echvi_2042	0.24	+0.0
2,409,731	-		Echvi_2042	0.24	-1.0
2,409,817	-		Echvi_2042	0.31	-0.7
2,409,850	+		Echvi_2042	0.33	-0.1
2,409,922	-		Echvi_2042	0.39	-1.1
2,409,926	-		Echvi_2042	0.39	-0.5
2,409,942	-		Echvi_2042	0.41	-0.7
2,409,959	-		Echvi_2042	0.42	-0.1
2,409,965	+		Echvi_2042	0.42	-0.1
2,409,965	+		Echvi_2042	0.42	+0.7
2,409,966	-		Echvi_2042	0.42	-0.7
2,409,967	+		Echvi_2042	0.43	+0.1
2,409,967	+		Echvi_2042	0.43	-0.8
2,409,968	-		Echvi_2042	0.43	+0.3
2,409,989	+		Echvi_2042	0.44	-0.8
2,409,989	+		Echvi_2042	0.44	-0.5
2,410,024	-		Echvi_2042	0.47	+1.7
2,410,024	-		Echvi_2042	0.47	-0.4
2,410,039	+		Echvi_2042	0.48	+2.7
2,410,040	-		Echvi_2042	0.48	-2.1
2,410,122	+		Echvi_2042	0.55	-0.5
2,410,123	-		Echvi_2042	0.55	+0.5
2,410,190	-		Echvi_2042	0.60	+1.1
2,410,213	-		Echvi_2042	0.62	-0.3
2,410,213	-		Echvi_2042	0.62	-1.9
2,410,213	-		Echvi_2042	0.62	+0.5
2,410,213	-		Echvi_2042	0.62	+0.7
2,410,235	-		Echvi_2042	0.64	-0.5
2,410,281	+		Echvi_2042	0.68	-0.3
2,410,282	-		Echvi_2042	0.68	+1.2
2,410,282	-		Echvi_2042	0.68	+0.7
2,410,312	+		Echvi_2042	0.70	+0.5
2,410,333	-		Echvi_2042	0.72	+0.7
2,410,333	-		Echvi_2042	0.72	-0.4
2,410,337	-		Echvi_2042	0.72	-0.1
2,410,377	+		Echvi_2042	0.76	-0.8
2,410,402	+		Echvi_2042	0.78	+0.0
2,410,416	+		Echvi_2042	0.79	+0.6
2,410,418	+		Echvi_2042	0.79	+0.7
2,410,419	-		Echvi_2042	0.79	+1.2
2,410,454	-		Echvi_2042	0.82	-0.3
2,410,457	+		Echvi_2042	0.82	+0.5
2,410,457	+		Echvi_2042	0.82	-1.8
2,410,457	+		Echvi_2042	0.82	-0.3
2,410,473	+		Echvi_2042	0.83	-0.5
2,410,481	+		Echvi_2042	0.84	-0.1
2,410,482	-		Echvi_2042	0.84	-0.3
2,410,482	-		Echvi_2042	0.84	-1.6
2,410,484	+		Echvi_2042	0.84	+1.7
2,410,486	+		Echvi_2042	0.84	-0.5
2,410,487	-		Echvi_2042	0.84	+0.4
2,410,487	-		Echvi_2042	0.84	-0.5
2,410,493	-		Echvi_2042	0.85	-0.7
2,410,493	-		Echvi_2042	0.85	+1.0
2,410,535	+		Echvi_2042	0.88	+0.7
2,410,536	-		Echvi_2042	0.88	-0.3
2,410,536	-		Echvi_2042	0.88	-1.3
2,410,574	-				-0.2
2,410,591	-				+0.0
2,410,597	+				+1.3
2,410,598	-				-0.3
2,410,598	-				-0.4
2,410,598	-				-1.7
2,410,598	-				-0.3
2,410,598	-				-0.1
2,410,601	-				-0.9
2,410,622	-				+0.4
2,410,660	+				+1.0
2,410,680	-				-0.1
2,410,686	-				-0.3
2,410,686	-				-0.2
2,410,686	-				-0.6
2,410,686	-				+0.3
2,410,699	+				+0.1
2,410,700	-				+0.7
2,410,700	-				+2.0
2,410,700	-				-0.6
2,410,727	+				-0.1
2,410,731	+				-0.6
2,410,772	+				+0.7
2,410,819	+				+0.5
2,410,820	-				+0.0
2,410,820	-				+0.1
2,410,821	+				+0.0
2,410,822	-				-0.3
2,410,822	-				-0.2
2,410,826	+				-0.2
2,410,827	-				-0.6
2,410,844	+				+0.1
2,410,844	+				-2.1
2,410,845	-				+0.2
2,410,851	+				+0.2
2,410,852	-				-0.3
2,410,938	+				-2.1
2,410,939	-				-0.3
2,410,939	-				-0.4
2,410,994	-		Echvi_2043	0.12	-1.1
2,410,999	+		Echvi_2043	0.13	+0.3
2,411,040	+		Echvi_2043	0.15	-0.0
2,411,053	+		Echvi_2043	0.15	+1.3
2,411,054	-		Echvi_2043	0.15	+0.1
2,411,065	-		Echvi_2043	0.16	+1.2
2,411,085	+		Echvi_2043	0.17	+0.3
2,411,085	+		Echvi_2043	0.17	-0.3
2,411,085	+		Echvi_2043	0.17	+1.0
2,411,085	+		Echvi_2043	0.17	+0.2
2,411,086	-		Echvi_2043	0.17	+0.3
2,411,087	+		Echvi_2043	0.17	+0.2
2,411,087	+		Echvi_2043	0.17	-2.3
2,411,157	+		Echvi_2043	0.20	-0.4
2,411,157	+		Echvi_2043	0.20	+0.9
2,411,157	+		Echvi_2043	0.20	+0.7
2,411,200	+		Echvi_2043	0.22	-0.4
2,411,200	+		Echvi_2043	0.22	-1.1
2,411,201	-		Echvi_2043	0.22	-0.5
2,411,203	-		Echvi_2043	0.22	-0.2
2,411,220	+		Echvi_2043	0.23	+1.2
2,411,220	+		Echvi_2043	0.23	-0.1
2,411,258	+		Echvi_2043	0.25	-0.1
2,411,259	-		Echvi_2043	0.25	+0.1
2,411,301	-		Echvi_2043	0.27	+0.7
2,411,301	-		Echvi_2043	0.27	+0.4
2,411,301	-		Echvi_2043	0.27	-0.8
2,411,302	+		Echvi_2043	0.27	+0.2
2,411,303	-		Echvi_2043	0.27	-0.1
2,411,342	+		Echvi_2043	0.29	+2.2
2,411,342	+		Echvi_2043	0.29	+0.6
2,411,347	+		Echvi_2043	0.29	+1.2
2,411,348	-		Echvi_2043	0.29	+0.2
2,411,349	+		Echvi_2043	0.29	+0.2
2,411,349	+		Echvi_2043	0.29	+0.6
2,411,350	-		Echvi_2043	0.29	+0.3
2,411,350	-		Echvi_2043	0.29	+0.6
2,411,356	+		Echvi_2043	0.30	-0.3
2,411,356	+		Echvi_2043	0.30	-0.8
2,411,357	-		Echvi_2043	0.30	-0.1
2,411,457	+		Echvi_2043	0.35	+0.4
2,411,460	+		Echvi_2043	0.35	+0.7
2,411,486	-		Echvi_2043	0.36	-0.1
2,411,493	+		Echvi_2043	0.36	-0.4
2,411,494	-		Echvi_2043	0.36	-1.8
2,411,494	-		Echvi_2043	0.36	-0.1
2,411,495	+		Echvi_2043	0.36	-1.6
2,411,496	-		Echvi_2043	0.36	-1.0
2,411,541	-		Echvi_2043	0.39	-1.1
2,411,552	-		Echvi_2043	0.39	+0.7
2,411,593	+		Echvi_2043	0.41	+0.4
2,411,601	-		Echvi_2043	0.41	-0.4
2,411,601	-		Echvi_2043	0.41	+0.6
2,411,613	+		Echvi_2043	0.42	+1.5