Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0917

Experiment: Cola_ML5_MIT diversity barseq

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cola_ML5_MIT diversity barseq
1,047,356	+		Echvi_0916	0.80	-1.0
1,047,357	-		Echvi_0916	0.80	-1.7
1,047,386	-		Echvi_0916	0.81	-0.9
1,047,424	-		Echvi_0916	0.82	-1.0
1,047,492	+		Echvi_0916	0.85	-0.9
1,047,492	+		Echvi_0916	0.85	-1.3
1,047,493	-		Echvi_0916	0.85	-0.5
1,047,493	-		Echvi_0916	0.85	+1.2
1,047,494	+		Echvi_0916	0.85	-0.6
1,047,494	+		Echvi_0916	0.85	-0.2
1,047,495	-		Echvi_0916	0.85	+0.2
1,047,498	-		Echvi_0916	0.85	+0.2
1,047,565	+		Echvi_0916	0.87	-0.1
1,047,612	-		Echvi_0916	0.89	-1.4
1,047,669	+				+0.2
1,047,850	+				+0.7
1,047,850	+				+0.7
1,047,877	+				-0.6
1,047,883	+				+0.7
1,047,883	+				+2.7
1,047,891	+				+0.2
1,047,911	+				+0.2
1,047,911	+				+0.7
1,047,912	-				+0.9
1,047,915	+				+0.1
1,047,915	+				+0.4
1,047,916	-				-0.1
1,047,919	+				+0.2
1,047,942	+				-1.9
1,047,957	+				+1.4
1,047,964	+				+0.1
1,047,964	+				-0.2
1,047,964	+				+0.1
1,047,965	-				-0.3
1,047,967	-				-0.7
1,048,021	+				+1.7
1,048,073	+				+0.0
1,048,073	+				-0.5
1,048,074	-				-1.2
1,048,074	-				-0.9
1,048,074	-				+0.7
1,048,079	+				-0.4
1,048,079	+				-1.3
1,048,164	+				+0.9
1,048,210	+				-0.9
1,048,211	-				+1.3
1,048,211	-				-0.3
1,048,211	-				-0.3
1,048,213	+				+0.5
1,048,226	+				+0.1
1,048,235	-				+0.7
1,048,235	-				-0.2
1,048,235	-				+0.0
1,048,246	-				-0.9
1,048,290	+				+0.7
1,048,291	-				-1.3
1,048,321	-				-0.2
1,048,337	+				-0.7
1,048,337	+				+0.9
1,048,409	-				+0.4
1,048,409	-				+1.1
1,048,414	+				+0.7
1,048,414	+				-0.5
1,048,434	-				-0.2
1,048,459	+				+1.1
1,048,460	-				+0.9
1,048,460	-				+0.4
1,048,470	+				+0.7
1,048,471	-				-1.1
1,048,481	+				-0.1
1,048,488	+				+1.4
1,048,488	+				+0.9
1,048,489	-				+1.6
1,048,489	-				+0.2
1,048,489	-				+3.0
1,048,616	+		Echvi_0917	0.16	-0.3
1,048,616	+		Echvi_0917	0.16	-0.5
1,048,616	+		Echvi_0917	0.16	+0.2
1,048,616	+		Echvi_0917	0.16	-0.5
1,048,616	+		Echvi_0917	0.16	+0.8
1,048,617	-				-0.1
1,048,617	-		Echvi_0917	0.16	-0.1
1,048,619	+		Echvi_0917	0.16	+0.8
1,048,673	+		Echvi_0917	0.19	+0.4
1,048,684	-		Echvi_0917	0.20	+0.2
1,048,685	+		Echvi_0917	0.20	+0.7
1,048,703	+		Echvi_0917	0.21	+0.1
1,048,718	+		Echvi_0917	0.22	+1.8
1,048,718	+		Echvi_0917	0.22	-0.3
1,048,719	-		Echvi_0917	0.22	+0.2
1,048,739	+		Echvi_0917	0.23	-0.5
1,048,769	+		Echvi_0917	0.25	-0.6
1,048,770	-		Echvi_0917	0.25	+0.2
1,048,770	-		Echvi_0917	0.25	+0.7
1,048,849	-		Echvi_0917	0.30	+1.2
1,048,986	-		Echvi_0917	0.38	-0.1
1,048,995	+		Echvi_0917	0.38	+0.3
1,049,087	-		Echvi_0917	0.44	-0.3
1,049,087	-		Echvi_0917	0.44	+1.6
1,049,120	+		Echvi_0917	0.46	+0.5
1,049,186	+		Echvi_0917	0.50	+1.7
1,049,192	+		Echvi_0917	0.50	+1.7
1,049,192	+		Echvi_0917	0.50	-0.1
1,049,192	+		Echvi_0917	0.50	-0.3
1,049,192	+		Echvi_0917	0.50	-0.3
1,049,192	+		Echvi_0917	0.50	-1.0
1,049,192	+		Echvi_0917	0.50	+1.5
1,049,192	+		Echvi_0917	0.50	-0.9
1,049,192	+		Echvi_0917	0.50	+0.1
1,049,192	+		Echvi_0917	0.50	+0.7
1,049,193	-		Echvi_0917	0.50	-0.1
1,049,193	-		Echvi_0917	0.50	+0.2
1,049,193	-		Echvi_0917	0.50	+0.7
1,049,193	-		Echvi_0917	0.50	+0.7
1,049,196	+		Echvi_0917	0.50	+0.5
1,049,196	+		Echvi_0917	0.50	-0.2
1,049,197	-		Echvi_0917	0.50	-0.6
1,049,197	-		Echvi_0917	0.50	+0.0
1,049,197	-		Echvi_0917	0.50	+1.3
1,049,321	+		Echvi_0917	0.58	+0.7
1,049,322	-		Echvi_0917	0.58	+1.1
1,049,357	+		Echvi_0917	0.60	+0.7
1,049,357	+		Echvi_0917	0.60	+0.2
1,049,357	+		Echvi_0917	0.60	-0.5
1,049,421	+		Echvi_0917	0.63	-0.8
1,049,422	-		Echvi_0917	0.63	+0.3
1,049,422	-		Echvi_0917	0.63	+0.7
1,049,486	+		Echvi_0917	0.67	-1.7
1,049,516	+		Echvi_0917	0.69	+0.7
1,049,516	+		Echvi_0917	0.69	-1.5
1,049,517	-		Echvi_0917	0.69	-0.5
1,049,517	-		Echvi_0917	0.69	-0.2
1,049,517	-		Echvi_0917	0.69	+0.7
1,049,520	+		Echvi_0917	0.69	-0.6
1,049,520	+		Echvi_0917	0.69	+0.3
1,049,520	+		Echvi_0917	0.69	+1.7
1,049,520	+		Echvi_0917	0.69	+1.4
1,049,520	+		Echvi_0917	0.69	+1.7
1,049,520	+		Echvi_0917	0.69	+1.7
1,049,521	-		Echvi_0917	0.69	-0.9
1,049,521	-		Echvi_0917	0.69	+0.4
1,049,521	-		Echvi_0917	0.69	+0.7
1,049,521	-		Echvi_0917	0.69	+1.1
1,049,552	+		Echvi_0917	0.71	-0.9
1,049,552	+		Echvi_0917	0.71	-0.5
1,049,552	+		Echvi_0917	0.71	-1.0
1,049,552	+		Echvi_0917	0.71	-0.3
1,049,552	+		Echvi_0917	0.71	+0.2
1,049,552	+		Echvi_0917	0.71	+0.7
1,049,552	+		Echvi_0917	0.71	-1.1
1,049,553	-		Echvi_0917	0.71	-0.3
1,049,553	-		Echvi_0917	0.71	-0.3
1,049,553	-		Echvi_0917	0.71	+0.4
1,049,553	-		Echvi_0917	0.71	+0.0
1,049,553	-		Echvi_0917	0.71	+0.7
1,049,565	-		Echvi_0917	0.72	+0.9
1,049,575	+		Echvi_0917	0.72	+0.5
1,049,576	-		Echvi_0917	0.73	+1.4
1,049,848	+		Echvi_0917	0.89	+1.4
1,049,849	-		Echvi_0917	0.89	+0.3
1,049,870	-		Echvi_0917	0.90	+0.8
1,050,006	-				+1.0
1,050,006	-				-2.1
1,050,035	+				+0.3
1,050,036	-				-0.8
1,050,084	+				-0.2
1,050,084	+				+0.6
1,050,085	-				+0.3
1,050,085	-				-2.1
1,050,085	-				-0.3
1,050,086	+				-0.9
1,050,087	-				-0.4
1,050,146	+				-0.9
1,050,146	+				-0.3
1,050,146	+				+0.1
1,050,146	+				-0.1
1,050,147	-				-0.5
1,050,148	+				+0.0
1,050,148	+				+0.1
1,050,148	+				-0.9
1,050,148	+				+0.7
1,050,148	+				+0.7
1,050,149	-				+0.1
1,050,149	-				+0.0
1,050,149	-				+0.1
1,050,149	-				+1.5
1,050,149	-				-0.7
1,050,149	-				+1.7
1,050,151	+				-0.8
1,050,224	+		Echvi_0918	0.14	+0.7
1,050,224	+		Echvi_0918	0.14	+0.1
1,050,224	+		Echvi_0918	0.14	+0.3
1,050,224	+		Echvi_0918	0.14	+0.5
1,050,224	+		Echvi_0918	0.14	-0.5
1,050,225	-		Echvi_0918	0.14	+1.7
1,050,243	-		Echvi_0918	0.16	+0.5
1,050,268	+		Echvi_0918	0.18	-1.8
1,050,289	-		Echvi_0918	0.19	-0.8
1,050,289	-		Echvi_0918	0.19	+0.1
1,050,293	-		Echvi_0918	0.20	-1.3
1,050,318	+		Echvi_0918	0.22	+0.3
1,050,337	+		Echvi_0918	0.23	+0.4
1,050,370	+		Echvi_0918	0.26	+0.2
1,050,370	+		Echvi_0918	0.26	+0.5
1,050,370	+		Echvi_0918	0.26	+0.1
1,050,370	+		Echvi_0918	0.26	+1.2
1,050,448	-		Echvi_0918	0.33	+0.2
1,050,449	-		Echvi_0918	0.33	+0.0
1,050,455	+		Echvi_0918	0.33	+0.1
1,050,455	+		Echvi_0918	0.33	-0.3
1,050,455	+		Echvi_0918	0.33	-0.3
1,050,629	-		Echvi_0918	0.47	+1.5
1,050,664	+		Echvi_0918	0.50	-0.6
1,050,665	-		Echvi_0918	0.50	-1.1
1,050,684	+		Echvi_0918	0.52	+1.0
1,050,727	+		Echvi_0918	0.55	-0.9
1,050,737	+		Echvi_0918	0.56	-0.9
1,050,737	+		Echvi_0918	0.56	+0.4
1,050,738	-		Echvi_0918	0.56	-0.9
1,050,754	+		Echvi_0918	0.58	-0.7
1,050,754	+		Echvi_0918	0.58	-0.9
1,050,754	+		Echvi_0918	0.58	-0.1
1,050,755	-		Echvi_0918	0.58	+1.0
1,050,785	-		Echvi_0918	0.60	+0.3
1,050,785	-		Echvi_0918	0.60	-0.1
1,050,937	+		Echvi_0918	0.73	+0.3
1,050,937	+		Echvi_0918	0.73	-0.3
1,050,938	-		Echvi_0918	0.73	-1.0
1,050,950	+		Echvi_0918	0.74	-0.5
1,050,950	+		Echvi_0918	0.74	-0.3
1,050,953	-		Echvi_0918	0.74	+0.7
1,050,953	-		Echvi_0918	0.74	+1.2
1,050,965	+		Echvi_0918	0.75	-0.9
1,050,983	+		Echvi_0918	0.76	-0.5
1,050,983	+		Echvi_0918	0.76	-0.1
1,050,983	+		Echvi_0918	0.76	+0.4
1,050,984	-		Echvi_0918	0.76	+0.1
1,050,984	-		Echvi_0918	0.76	-0.7
1,050,986	+		Echvi_0918	0.77	-0.8
1,050,986	+		Echvi_0918	0.77	-0.9
1,051,016	-		Echvi_0918	0.79	-1.1
1,051,033	+		Echvi_0918	0.80	-0.3