Experiment: V2_1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21255 and ABID97_RS21260 are separated by 34 nucleotides ABID97_RS21260 and ABID97_RS21265 overlap by 4 nucleotides ABID97_RS21265 and ABID97_RS21270 are separated by 109 nucleotides
ABID97_RS21255: ABID97_RS21255 - Fe(3+) ABC transporter substrate-binding protein, at 4,387,031 to 4,388,092
_RS21255
ABID97_RS21260: ABID97_RS21260 - iron ABC transporter permease, at 4,388,127 to 4,389,806
_RS21260
ABID97_RS21265: ABID97_RS21265 - ABC transporter ATP-binding protein, at 4,389,803 to 4,390,486
_RS21265
ABID97_RS21270: ABID97_RS21270 - glutathione S-transferase family protein, at 4,390,596 to 4,391,276
_RS21270
Position (kb) 4388
4389
4390 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4387.149 kb on - strand, within ABID97_RS21255 at 4387.151 kb on - strand, within ABID97_RS21255 at 4387.151 kb on - strand, within ABID97_RS21255 at 4387.481 kb on + strand, within ABID97_RS21255 at 4387.544 kb on + strand, within ABID97_RS21255 at 4387.544 kb on + strand, within ABID97_RS21255 at 4387.545 kb on - strand, within ABID97_RS21255 at 4387.545 kb on - strand, within ABID97_RS21255 at 4387.545 kb on - strand, within ABID97_RS21255 at 4387.712 kb on + strand, within ABID97_RS21255 at 4387.712 kb on + strand, within ABID97_RS21255 at 4387.712 kb on + strand, within ABID97_RS21255 at 4387.712 kb on + strand, within ABID97_RS21255 at 4387.712 kb on + strand, within ABID97_RS21255 at 4387.712 kb on + strand, within ABID97_RS21255 at 4387.713 kb on - strand, within ABID97_RS21255 at 4387.713 kb on - strand, within ABID97_RS21255 at 4387.715 kb on + strand, within ABID97_RS21255 at 4387.715 kb on + strand, within ABID97_RS21255 at 4387.716 kb on - strand, within ABID97_RS21255 at 4387.716 kb on - strand, within ABID97_RS21255 at 4387.716 kb on - strand, within ABID97_RS21255 at 4387.925 kb on + strand, within ABID97_RS21255 at 4387.925 kb on + strand, within ABID97_RS21255 at 4387.926 kb on - strand, within ABID97_RS21255 at 4387.940 kb on + strand, within ABID97_RS21255 at 4387.940 kb on + strand, within ABID97_RS21255 at 4387.940 kb on + strand, within ABID97_RS21255 at 4387.941 kb on - strand, within ABID97_RS21255 at 4387.947 kb on - strand, within ABID97_RS21255 at 4388.470 kb on - strand, within ABID97_RS21260 at 4388.613 kb on + strand, within ABID97_RS21260 at 4388.614 kb on - strand, within ABID97_RS21260 at 4388.619 kb on + strand, within ABID97_RS21260 at 4388.619 kb on + strand, within ABID97_RS21260 at 4388.620 kb on - strand, within ABID97_RS21260 at 4388.620 kb on - strand, within ABID97_RS21260 at 4388.620 kb on - strand, within ABID97_RS21260 at 4388.620 kb on - strand, within ABID97_RS21260 at 4388.620 kb on - strand, within ABID97_RS21260 at 4388.620 kb on - strand, within ABID97_RS21260 at 4388.835 kb on + strand, within ABID97_RS21260 at 4388.835 kb on + strand, within ABID97_RS21260 at 4389.072 kb on + strand, within ABID97_RS21260 at 4389.072 kb on + strand, within ABID97_RS21260 at 4389.072 kb on + strand, within ABID97_RS21260 at 4389.073 kb on - strand, within ABID97_RS21260 at 4389.073 kb on - strand, within ABID97_RS21260 at 4389.073 kb on - strand, within ABID97_RS21260 at 4389.663 kb on + strand at 4389.687 kb on + strand at 4389.688 kb on - strand at 4390.079 kb on + strand, within ABID97_RS21265 at 4390.080 kb on - strand, within ABID97_RS21265 at 4390.080 kb on - strand, within ABID97_RS21265 at 4390.484 kb on + strand at 4390.484 kb on + strand at 4390.484 kb on + strand at 4390.485 kb on - strand at 4390.485 kb on - strand at 4390.485 kb on - strand at 4390.485 kb on - strand at 4390.638 kb on + strand at 4390.638 kb on + strand at 4390.639 kb on - strand at 4390.678 kb on + strand, within ABID97_RS21270 at 4390.679 kb on - strand, within ABID97_RS21270 at 4390.684 kb on - strand, within ABID97_RS21270
Per-strain Table
Position Strand Gene LocusTag Fraction V2_1 remove 4,387,149 - ABID97_RS21255 0.11 +0.5 4,387,151 - ABID97_RS21255 0.11 +0.5 4,387,151 - ABID97_RS21255 0.11 -0.0 4,387,481 + ABID97_RS21255 0.42 -0.4 4,387,544 + ABID97_RS21255 0.48 -0.0 4,387,544 + ABID97_RS21255 0.48 -0.0 4,387,545 - ABID97_RS21255 0.48 -0.1 4,387,545 - ABID97_RS21255 0.48 +2.2 4,387,545 - ABID97_RS21255 0.48 -0.5 4,387,712 + ABID97_RS21255 0.64 +0.2 4,387,712 + ABID97_RS21255 0.64 -0.1 4,387,712 + ABID97_RS21255 0.64 -0.2 4,387,712 + ABID97_RS21255 0.64 -0.4 4,387,712 + ABID97_RS21255 0.64 -1.9 4,387,712 + ABID97_RS21255 0.64 +0.1 4,387,713 - ABID97_RS21255 0.64 -0.2 4,387,713 - ABID97_RS21255 0.64 +0.4 4,387,715 + ABID97_RS21255 0.64 +0.1 4,387,715 + ABID97_RS21255 0.64 -1.1 4,387,716 - ABID97_RS21255 0.65 -0.3 4,387,716 - ABID97_RS21255 0.65 -0.4 4,387,716 - ABID97_RS21255 0.65 +0.0 4,387,925 + ABID97_RS21255 0.84 +0.2 4,387,925 + ABID97_RS21255 0.84 -0.0 4,387,926 - ABID97_RS21255 0.84 +0.0 4,387,940 + ABID97_RS21255 0.86 -1.6 4,387,940 + ABID97_RS21255 0.86 -0.1 4,387,940 + ABID97_RS21255 0.86 -0.1 4,387,941 - ABID97_RS21255 0.86 -0.0 4,387,947 - ABID97_RS21255 0.86 -0.1 4,388,470 - ABID97_RS21260 0.20 +0.4 4,388,613 + ABID97_RS21260 0.29 +0.7 4,388,614 - ABID97_RS21260 0.29 -0.2 4,388,619 + ABID97_RS21260 0.29 -0.4 4,388,619 + ABID97_RS21260 0.29 -0.1 4,388,620 - ABID97_RS21260 0.29 -0.9 4,388,620 - ABID97_RS21260 0.29 -0.0 4,388,620 - ABID97_RS21260 0.29 +0.3 4,388,620 - ABID97_RS21260 0.29 +0.3 4,388,620 - ABID97_RS21260 0.29 -0.9 4,388,620 - ABID97_RS21260 0.29 +0.2 4,388,835 + ABID97_RS21260 0.42 +0.2 4,388,835 + ABID97_RS21260 0.42 -0.1 4,389,072 + ABID97_RS21260 0.56 +0.3 4,389,072 + ABID97_RS21260 0.56 +0.4 4,389,072 + ABID97_RS21260 0.56 -0.5 4,389,073 - ABID97_RS21260 0.56 +0.0 4,389,073 - ABID97_RS21260 0.56 -0.0 4,389,073 - ABID97_RS21260 0.56 -0.6 4,389,663 + +0.8 4,389,687 + -0.1 4,389,688 - +0.1 4,390,079 + ABID97_RS21265 0.40 +1.2 4,390,080 - ABID97_RS21265 0.40 +0.5 4,390,080 - ABID97_RS21265 0.40 +0.8 4,390,484 + +0.3 4,390,484 + -0.5 4,390,484 + +1.2 4,390,485 - -1.5 4,390,485 - +0.2 4,390,485 - +0.4 4,390,485 - +0.0 4,390,638 + +0.9 4,390,638 + +0.6 4,390,639 - -0.8 4,390,678 + ABID97_RS21270 0.12 -0.4 4,390,679 - ABID97_RS21270 0.12 +0.3 4,390,684 - ABID97_RS21270 0.13 -0.5
Or see this region's nucleotide sequence