Experiment: V1_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS15480 and ABID97_RS15485 overlap by 1 nucleotides ABID97_RS15485 and ABID97_RS15490 are separated by 32 nucleotides ABID97_RS15490 and ABID97_RS15495 are separated by 8 nucleotides ABID97_RS15495 and ABID97_RS15500 are separated by 11 nucleotides
ABID97_RS15480: ABID97_RS15480 - sulfonate ABC transporter substrate-binding protein, at 3,203,041 to 3,203,997
_RS15480
ABID97_RS15485: ABID97_RS15485 - hypothetical protein, at 3,203,997 to 3,204,146
_RS15485
ABID97_RS15490: ABID97_RS15490 - FMNH2-dependent alkanesulfonate monooxygenase, at 3,204,179 to 3,205,348
_RS15490
ABID97_RS15495: ABID97_RS15495 - aliphatic sulfonate ABC transporter permease SsuC, at 3,205,357 to 3,206,205
_RS15495
ABID97_RS15500: ABID97_RS15500 - aliphatic sulfonate ABC transporter substrate-binding protein, at 3,206,217 to 3,207,194
_RS15500
Position (kb) 3204
3205
3206 Strain fitness (log2 ratio) -2
-1
0
1 at 3203.357 kb on - strand, within ABID97_RS15480 at 3203.483 kb on - strand, within ABID97_RS15480 at 3203.522 kb on - strand, within ABID97_RS15480 at 3203.689 kb on + strand, within ABID97_RS15480 at 3203.692 kb on + strand, within ABID97_RS15480 at 3203.692 kb on + strand, within ABID97_RS15480 at 3203.693 kb on - strand, within ABID97_RS15480 at 3203.929 kb on + strand at 3204.187 kb on - strand at 3204.264 kb on - strand at 3204.537 kb on - strand, within ABID97_RS15490 at 3204.558 kb on - strand, within ABID97_RS15490 at 3204.674 kb on + strand, within ABID97_RS15490 at 3204.764 kb on + strand, within ABID97_RS15490 at 3204.765 kb on - strand, within ABID97_RS15490 at 3204.765 kb on - strand, within ABID97_RS15490 at 3204.765 kb on - strand, within ABID97_RS15490 at 3205.151 kb on + strand, within ABID97_RS15490 at 3205.370 kb on + strand at 3205.371 kb on - strand at 3205.838 kb on - strand, within ABID97_RS15495 at 3205.900 kb on + strand, within ABID97_RS15495 at 3206.222 kb on + strand at 3206.222 kb on + strand at 3206.223 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction V1_10 remove 3,203,357 - ABID97_RS15480 0.33 +0.4 3,203,483 - ABID97_RS15480 0.46 -0.4 3,203,522 - ABID97_RS15480 0.50 -0.9 3,203,689 + ABID97_RS15480 0.68 -0.5 3,203,692 + ABID97_RS15480 0.68 +1.0 3,203,692 + ABID97_RS15480 0.68 +0.0 3,203,693 - ABID97_RS15480 0.68 -0.5 3,203,929 + -0.4 3,204,187 - +0.0 3,204,264 - -0.3 3,204,537 - ABID97_RS15490 0.31 -0.2 3,204,558 - ABID97_RS15490 0.32 -0.3 3,204,674 + ABID97_RS15490 0.42 -2.5 3,204,764 + ABID97_RS15490 0.50 +0.5 3,204,765 - ABID97_RS15490 0.50 +0.2 3,204,765 - ABID97_RS15490 0.50 +0.3 3,204,765 - ABID97_RS15490 0.50 +1.2 3,205,151 + ABID97_RS15490 0.83 +0.2 3,205,370 + -0.1 3,205,371 - -0.9 3,205,838 - ABID97_RS15495 0.57 -1.3 3,205,900 + ABID97_RS15495 0.64 +0.4 3,206,222 + +0.2 3,206,222 + -0.2 3,206,223 - -0.1
Or see this region's nucleotide sequence