Strain Fitness in Variovorax sp. OAS795 around ABID97_RS05450

Experiment: V1_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	V1_10
1,138,404	+		ABID97_RS05435	0.53	+0.0
1,138,404	+		ABID97_RS05435	0.53	-0.0
1,138,405	-		ABID97_RS05435	0.53	-0.5
1,138,405	-		ABID97_RS05435	0.53	+0.1
1,138,405	-		ABID97_RS05435	0.53	+0.5
1,138,405	-		ABID97_RS05435	0.53	-1.6
1,138,405	-		ABID97_RS05435	0.53	-2.7
1,138,405	-		ABID97_RS05435	0.53	+0.3
1,138,405	-		ABID97_RS05435	0.53	-0.2
1,138,405	-		ABID97_RS05435	0.53	+0.2
1,138,405	-		ABID97_RS05435	0.53	-2.3
1,138,406	+		ABID97_RS05435	0.54	+0.3
1,138,406	+		ABID97_RS05435	0.54	-0.3
1,138,406	+		ABID97_RS05435	0.54	-0.2
1,138,406	+		ABID97_RS05435	0.54	-0.4
1,138,406	+		ABID97_RS05435	0.54	-0.8
1,138,407	-		ABID97_RS05435	0.54	+0.8
1,138,407	-		ABID97_RS05435	0.54	-0.1
1,138,407	-		ABID97_RS05435	0.54	+1.3
1,138,407	-		ABID97_RS05435	0.54	+0.5
1,138,407	-		ABID97_RS05435	0.54	+0.7
1,138,410	+		ABID97_RS05435	0.55	-0.2
1,138,410	+		ABID97_RS05435	0.55	-0.1
1,138,410	+		ABID97_RS05435	0.55	-0.5
1,138,410	+		ABID97_RS05435	0.55	+0.8
1,138,410	+		ABID97_RS05435	0.55	-0.3
1,138,411	-		ABID97_RS05435	0.55	+0.2
1,138,411	-		ABID97_RS05435	0.55	-0.6
1,138,411	-		ABID97_RS05435	0.55	-0.2
1,138,411	-		ABID97_RS05435	0.55	+0.6
1,138,411	-		ABID97_RS05435	0.55	+0.6
1,138,411	-		ABID97_RS05435	0.55	-0.6
1,138,411	-		ABID97_RS05435	0.55	+0.8
1,138,543	+				-0.2
1,138,543	+				-0.2
1,138,544	-				-0.4
1,138,544	-				-0.8
1,138,590	+				-0.4
1,138,590	+				+2.4
1,138,590	+				-0.2
1,138,590	+				-0.1
1,138,590	+				-0.2
1,138,590	+				-0.1
1,138,590	+				+0.0
1,138,591	-				-0.4
1,138,591	-				-0.3
1,138,591	-				+0.8
1,138,591	-				+0.1
1,138,613	+				-0.1
1,138,613	+				-0.0
1,138,613	+				-0.5
1,138,613	+				-0.6
1,138,613	+				+0.1
1,138,613	+				-0.7
1,138,614	-				-0.1
1,138,663	-				-0.2
1,138,669	+				-0.6
1,138,669	+				-0.4
1,138,669	+				+0.3
1,138,669	+				+0.3
1,138,669	+				-0.3
1,138,670	-				+0.5
1,138,809	-		ABID97_RS05440	0.41	-0.7
1,138,816	+		ABID97_RS05440	0.43	+0.1
1,138,840	+		ABID97_RS05440	0.50	-0.0
1,138,840	+		ABID97_RS05440	0.50	-0.3
1,138,898	+		ABID97_RS05440	0.66	+1.6
1,138,898	+		ABID97_RS05440	0.66	-0.4
1,138,917	+		ABID97_RS05440	0.72	+0.5
1,139,048	-		ABID97_RS05445	0.21	-1.1
1,139,660	+		ABID97_RS05450	0.19	-0.2
1,139,660	+		ABID97_RS05450	0.19	-0.2
1,139,660	+		ABID97_RS05450	0.19	+0.2
1,139,660	+		ABID97_RS05450	0.19	-0.4
1,139,660	+		ABID97_RS05450	0.19	+0.3
1,139,660	+		ABID97_RS05450	0.19	+0.6
1,139,660	+		ABID97_RS05450	0.19	-0.6
1,139,661	-		ABID97_RS05450	0.19	-0.2
1,139,661	-		ABID97_RS05450	0.19	-1.2
1,139,661	-		ABID97_RS05450	0.19	-1.2
1,139,661	-		ABID97_RS05450	0.19	-0.1
1,139,661	-		ABID97_RS05450	0.19	-1.6
1,139,661	-		ABID97_RS05450	0.19	-1.0
1,139,661	-		ABID97_RS05450	0.19	-0.1
1,139,682	-		ABID97_RS05450	0.20	-0.4
1,139,684	+		ABID97_RS05450	0.20	-0.2
1,139,684	+		ABID97_RS05450	0.20	+0.3
1,139,684	+		ABID97_RS05450	0.20	+0.2
1,139,684	+		ABID97_RS05450	0.20	+0.3
1,139,684	+		ABID97_RS05450	0.20	-0.5
1,139,684	+		ABID97_RS05450	0.20	-0.5
1,139,684	+		ABID97_RS05450	0.20	-0.1
1,139,684	+		ABID97_RS05450	0.20	-0.2
1,139,684	+		ABID97_RS05450	0.20	+0.1
1,139,684	+		ABID97_RS05450	0.20	-0.4
1,139,685	-		ABID97_RS05450	0.20	-0.2
1,139,685	-		ABID97_RS05450	0.20	-0.4
1,139,685	-		ABID97_RS05450	0.20	+0.4
1,139,685	-		ABID97_RS05450	0.20	-0.6
1,139,685	-		ABID97_RS05450	0.20	-0.6
1,139,685	-		ABID97_RS05450	0.20	-1.0
1,139,685	-		ABID97_RS05450	0.20	-0.3
1,139,685	-		ABID97_RS05450	0.20	-0.7
1,139,685	-		ABID97_RS05450	0.20	-0.7
1,139,685	-		ABID97_RS05450	0.20	-0.6
1,139,685	-		ABID97_RS05450	0.20	-0.4
1,139,685	-		ABID97_RS05450	0.20	-0.6
1,139,721	-		ABID97_RS05450	0.23	-0.2
1,139,721	-		ABID97_RS05450	0.23	+1.1
1,139,721	-		ABID97_RS05450	0.23	-1.5
1,139,721	-		ABID97_RS05450	0.23	-1.1
1,139,778	-		ABID97_RS05450	0.26	-0.6
1,139,778	-		ABID97_RS05450	0.26	-0.5
1,139,873	+		ABID97_RS05450	0.33	+0.2
1,140,061	+		ABID97_RS05450	0.45	+0.1
1,140,061	+		ABID97_RS05450	0.45	-0.6
1,140,062	-		ABID97_RS05450	0.45	-1.9
1,140,062	-		ABID97_RS05450	0.45	+0.2
1,140,062	-		ABID97_RS05450	0.45	-0.6
1,140,062	-		ABID97_RS05450	0.45	-0.7
1,140,062	-		ABID97_RS05450	0.45	-1.3
1,140,167	+		ABID97_RS05450	0.52	-0.1
1,140,904	+				-0.6
1,140,905	-				-0.3
1,140,905	-				+0.1
1,140,915	-				-1.1
1,140,995	-				-0.5
1,141,325	-		ABID97_RS05455	0.43	-0.4
1,141,325	-		ABID97_RS05455	0.43	-0.7
1,141,325	-		ABID97_RS05455	0.43	-0.2
1,141,411	+		ABID97_RS05455	0.52	-0.1
1,141,412	-		ABID97_RS05455	0.52	+0.3
1,141,412	-		ABID97_RS05455	0.52	+0.2
1,141,412	-		ABID97_RS05455	0.52	-0.3
1,141,417	+		ABID97_RS05455	0.52	-0.2
1,141,417	+		ABID97_RS05455	0.52	-0.7
1,141,417	+		ABID97_RS05455	0.52	-0.1
1,141,417	+		ABID97_RS05455	0.52	-0.3
1,141,417	+		ABID97_RS05455	0.52	-1.0
1,141,417	+		ABID97_RS05455	0.52	+0.1
1,141,418	-		ABID97_RS05455	0.52	-0.3
1,141,418	-		ABID97_RS05455	0.52	-1.2
1,141,418	-		ABID97_RS05455	0.52	-1.0
1,141,418	-		ABID97_RS05455	0.52	-0.7
1,141,418	-		ABID97_RS05455	0.52	+0.8
1,141,418	-		ABID97_RS05455	0.52	+1.2
1,141,418	-		ABID97_RS05455	0.52	+0.1
1,141,418	-		ABID97_RS05455	0.52	+0.0
1,141,441	+		ABID97_RS05455	0.55	-0.2
1,141,441	+		ABID97_RS05455	0.55	-0.5
1,141,441	+		ABID97_RS05455	0.55	+0.1
1,141,441	+		ABID97_RS05455	0.55	-0.2
1,141,550	-		ABID97_RS05455	0.66	-0.6
1,141,550	-		ABID97_RS05455	0.66	-0.3
1,141,550	-		ABID97_RS05455	0.66	+0.1
1,141,615	+		ABID97_RS05455	0.72	+1.1
1,141,615	+		ABID97_RS05455	0.72	-2.2
1,141,616	-		ABID97_RS05455	0.72	+0.1
1,141,616	-		ABID97_RS05455	0.72	-0.9
1,141,642	+		ABID97_RS05455	0.75	+0.0
1,141,642	+		ABID97_RS05455	0.75	+0.7
1,141,642	+		ABID97_RS05455	0.75	-0.6
1,141,642	+		ABID97_RS05455	0.75	+0.1
1,141,642	+		ABID97_RS05455	0.75	-0.3
1,141,642	+		ABID97_RS05455	0.75	-0.2
1,141,642	+		ABID97_RS05455	0.75	+0.0
1,141,642	+		ABID97_RS05455	0.75	-1.0
1,141,642	+		ABID97_RS05455	0.75	+1.4
1,141,643	-		ABID97_RS05455	0.75	+0.1
1,141,643	-		ABID97_RS05455	0.75	+0.3
1,141,643	-		ABID97_RS05455	0.75	-0.7
1,141,643	-		ABID97_RS05455	0.75	-0.5
1,141,643	-		ABID97_RS05455	0.75	-1.3
1,141,643	-		ABID97_RS05455	0.75	-0.5
1,141,643	-		ABID97_RS05455	0.75	+0.0
1,141,643	-		ABID97_RS05455	0.75	-0.6
1,141,643	-		ABID97_RS05455	0.75	-0.2
1,141,643	-		ABID97_RS05455	0.75	+0.3
1,141,643	-		ABID97_RS05455	0.75	+1.1
1,141,643	-		ABID97_RS05455	0.75	-1.2
1,141,643	-		ABID97_RS05455	0.75	+0.0