Experiment: NP
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS28730 and ABID97_RS28735 overlap by 4 nucleotides ABID97_RS28735 and ABID97_RS28740 are separated by 91 nucleotides ABID97_RS28740 and ABID97_RS28745 are separated by 84 nucleotides
ABID97_RS28730: ABID97_RS28730 - PAS domain-containing sensor histidine kinase, at 662,432 to 663,580
_RS28730
ABID97_RS28735: ABID97_RS28735 - alpha/beta hydrolase, at 663,577 to 664,392
_RS28735
ABID97_RS28740: ABID97_RS28740 - NADH:flavin oxidoreductase/NADH oxidase, at 664,484 to 665,599
_RS28740
ABID97_RS28745: ABID97_RS28745 - GMC family oxidoreductase N-terminal domain-containing protein, at 665,684 to 667,282
_RS28745
Position (kb) 664
665
666 Strain fitness (log2 ratio) -1
0
1 at 663.716 kb on + strand, within ABID97_RS28735 at 663.716 kb on + strand, within ABID97_RS28735 at 663.716 kb on + strand, within ABID97_RS28735 at 663.716 kb on + strand, within ABID97_RS28735 at 663.947 kb on + strand, within ABID97_RS28735 at 663.948 kb on - strand, within ABID97_RS28735 at 664.026 kb on - strand, within ABID97_RS28735 at 664.026 kb on - strand, within ABID97_RS28735 at 664.211 kb on + strand, within ABID97_RS28735 at 664.614 kb on + strand, within ABID97_RS28740 at 664.758 kb on + strand, within ABID97_RS28740 at 664.759 kb on - strand, within ABID97_RS28740 at 665.053 kb on - strand, within ABID97_RS28740 at 665.379 kb on + strand, within ABID97_RS28740 at 665.686 kb on - strand at 665.887 kb on - strand, within ABID97_RS28745 at 666.199 kb on - strand, within ABID97_RS28745 at 666.199 kb on - strand, within ABID97_RS28745 at 666.315 kb on + strand, within ABID97_RS28745 at 666.417 kb on + strand, within ABID97_RS28745 at 666.417 kb on + strand, within ABID97_RS28745 at 666.417 kb on + strand, within ABID97_RS28745 at 666.417 kb on + strand, within ABID97_RS28745 at 666.463 kb on - strand, within ABID97_RS28745
Per-strain Table
Position Strand Gene LocusTag Fraction NP remove 663,716 + ABID97_RS28735 0.17 -0.6 663,716 + ABID97_RS28735 0.17 -0.7 663,716 + ABID97_RS28735 0.17 +0.1 663,716 + ABID97_RS28735 0.17 -0.2 663,947 + ABID97_RS28735 0.45 -0.2 663,948 - ABID97_RS28735 0.45 +0.7 664,026 - ABID97_RS28735 0.55 -0.3 664,026 - ABID97_RS28735 0.55 -0.1 664,211 + ABID97_RS28735 0.78 +0.0 664,614 + ABID97_RS28740 0.12 +0.5 664,758 + ABID97_RS28740 0.25 -0.3 664,759 - ABID97_RS28740 0.25 -0.0 665,053 - ABID97_RS28740 0.51 +0.8 665,379 + ABID97_RS28740 0.80 +1.7 665,686 - +0.8 665,887 - ABID97_RS28745 0.13 -1.3 666,199 - ABID97_RS28745 0.32 +0.0 666,199 - ABID97_RS28745 0.32 +0.7 666,315 + ABID97_RS28745 0.39 +0.6 666,417 + ABID97_RS28745 0.46 +0.5 666,417 + ABID97_RS28745 0.46 -0.8 666,417 + ABID97_RS28745 0.46 -0.2 666,417 + ABID97_RS28745 0.46 +0.5 666,463 - ABID97_RS28745 0.49 +0.3
Or see this region's nucleotide sequence