Experiment: NP
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14275 and ABID97_RS14280 are separated by 24 nucleotides ABID97_RS14280 and ABID97_RS14285 are separated by 18 nucleotides ABID97_RS14285 and ABID97_RS14290 are separated by 27 nucleotides
ABID97_RS14275: ABID97_RS14275 - ATP phosphoribosyltransferase regulatory subunit, at 2,969,003 to 2,970,163
_RS14275
ABID97_RS14280: ABID97_RS14280 - adenylosuccinate synthase, at 2,970,188 to 2,971,519
_RS14280
ABID97_RS14285: ABID97_RS14285 - phosphoribosyltransferase, at 2,971,538 to 2,972,062
_RS14285
ABID97_RS14290: ABID97_RS14290 - VOC family protein, at 2,972,090 to 2,972,539
_RS14290
Position (kb)
2970
2971
2972 Strain fitness (log2 ratio)
-1
0
1 at 2971.505 kb on + strand at 2971.506 kb on - strand at 2971.506 kb on - strand at 2971.565 kb on + strand at 2971.565 kb on + strand at 2971.566 kb on - strand at 2971.566 kb on - strand at 2971.566 kb on - strand at 2971.566 kb on - strand at 2971.575 kb on - strand at 2971.584 kb on - strand at 2971.892 kb on + strand, within ABID97_RS14285 at 2971.892 kb on + strand, within ABID97_RS14285 at 2971.892 kb on + strand, within ABID97_RS14285 at 2971.892 kb on + strand, within ABID97_RS14285 at 2971.892 kb on + strand, within ABID97_RS14285 at 2971.893 kb on - strand, within ABID97_RS14285 at 2971.893 kb on - strand, within ABID97_RS14285 at 2971.893 kb on - strand, within ABID97_RS14285 at 2971.961 kb on + strand, within ABID97_RS14285 at 2972.016 kb on - strand at 2972.119 kb on - strand at 2972.217 kb on + strand, within ABID97_RS14290 at 2972.218 kb on - strand, within ABID97_RS14290 at 2972.218 kb on - strand, within ABID97_RS14290 at 2972.352 kb on + strand, within ABID97_RS14290 at 2972.353 kb on - strand, within ABID97_RS14290 at 2972.353 kb on - strand, within ABID97_RS14290 at 2972.475 kb on + strand, within ABID97_RS14290 at 2972.476 kb on - strand, within ABID97_RS14290 at 2972.476 kb on - strand, within ABID97_RS14290 at 2972.515 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NP remove 2,971,505 + -1.0 2,971,506 - +0.4 2,971,506 - +0.3 2,971,565 + +1.3 2,971,565 + +0.3 2,971,566 - -1.3 2,971,566 - -1.3 2,971,566 - -1.3 2,971,566 - -0.0 2,971,575 - -0.6 2,971,584 - +0.5 2,971,892 + ABID97_RS14285 0.67 -0.3 2,971,892 + ABID97_RS14285 0.67 -0.7 2,971,892 + ABID97_RS14285 0.67 -0.8 2,971,892 + ABID97_RS14285 0.67 +1.5 2,971,892 + ABID97_RS14285 0.67 -0.5 2,971,893 - ABID97_RS14285 0.68 -0.3 2,971,893 - ABID97_RS14285 0.68 -1.0 2,971,893 - ABID97_RS14285 0.68 +0.5 2,971,961 + ABID97_RS14285 0.81 -0.5 2,972,016 - -0.7 2,972,119 - -1.0 2,972,217 + ABID97_RS14290 0.28 -0.1 2,972,218 - ABID97_RS14290 0.28 +0.4 2,972,218 - ABID97_RS14290 0.28 -0.0 2,972,352 + ABID97_RS14290 0.58 -0.5 2,972,353 - ABID97_RS14290 0.58 +0.5 2,972,353 - ABID97_RS14290 0.58 +0.0 2,972,475 + ABID97_RS14290 0.86 -0.4 2,972,476 - ABID97_RS14290 0.86 -0.6 2,972,476 - ABID97_RS14290 0.86 +0.3 2,972,515 - +0.2
Or see this region's nucleotide sequence