Strain Fitness in Variovorax sp. OAS795 around ABID97_RS14100

Experiment: NP

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NP
2,926,527	+		ABID97_RS14095	0.77	-0.8
2,926,527	+		ABID97_RS14095	0.77	-0.8
2,926,528	-		ABID97_RS14095	0.77	-1.3
2,926,528	-		ABID97_RS14095	0.77	+0.9
2,926,612	+		ABID97_RS14095	0.80	-1.6
2,926,612	+		ABID97_RS14095	0.80	-1.0
2,926,612	+		ABID97_RS14095	0.80	-0.8
2,927,122	+				-0.3
2,927,122	+				-1.1
2,927,122	+				+1.5
2,927,122	+				-0.0
2,927,123	-				-0.2
2,927,215	-				-1.7
2,927,215	-				+0.1
2,927,247	+				+0.5
2,927,247	+				-0.4
2,927,251	+				-1.3
2,927,251	+				+0.8
2,927,251	+				+0.7
2,927,251	+				+0.9
2,927,251	+				-0.8
2,927,252	-				+1.2
2,927,252	-				+0.0
2,927,252	-				-0.4
2,927,252	-				-0.8
2,927,252	-				+0.2
2,927,252	-				-0.4
2,927,254	-				-0.6
2,927,309	+				-0.5
2,927,311	+				-0.2
2,927,311	+				-0.4
2,927,311	+				-1.1
2,927,311	+				-0.9
2,927,312	-				-1.1
2,927,312	-				-0.2
2,927,312	-				-1.1
2,927,513	+				-0.1
2,927,520	+				-1.1
2,927,520	+				-1.7
2,927,520	+				-0.8
2,927,595	+				-3.3
2,927,595	+				-0.5
2,927,596	-				-1.7
2,927,769	+		ABID97_RS14100	0.16	-1.8
2,927,769	+		ABID97_RS14100	0.16	-1.2
2,927,769	+		ABID97_RS14100	0.16	-1.5
2,927,770	-		ABID97_RS14100	0.16	-0.1
2,927,770	-		ABID97_RS14100	0.16	-0.1
2,927,770	-		ABID97_RS14100	0.16	-1.2
2,927,770	-		ABID97_RS14100	0.16	+1.5
2,927,799	+		ABID97_RS14100	0.17	-0.7
2,927,799	+		ABID97_RS14100	0.17	-2.0
2,927,800	-		ABID97_RS14100	0.17	-1.7
2,927,800	-		ABID97_RS14100	0.17	-1.1
2,927,800	-		ABID97_RS14100	0.17	-0.4
2,927,886	+		ABID97_RS14100	0.21	-0.3
2,927,964	+		ABID97_RS14100	0.24	-0.9
2,927,965	-		ABID97_RS14100	0.24	-2.0
2,927,965	-		ABID97_RS14100	0.24	-2.1
2,927,965	-		ABID97_RS14100	0.24	-1.7
2,927,965	-		ABID97_RS14100	0.24	-1.0
2,927,985	+		ABID97_RS14100	0.24	-1.8
2,927,985	+		ABID97_RS14100	0.24	-0.8
2,927,986	-		ABID97_RS14100	0.24	-2.2
2,928,705	+		ABID97_RS14100	0.51	-0.9
2,928,706	-		ABID97_RS14100	0.51	-0.3
2,928,706	-		ABID97_RS14100	0.51	-2.1
2,928,855	+		ABID97_RS14100	0.56	-1.6
2,928,855	+		ABID97_RS14100	0.56	-1.0
2,928,975	+		ABID97_RS14100	0.61	-0.9
2,928,975	+		ABID97_RS14100	0.61	-0.9
2,928,975	+		ABID97_RS14100	0.61	-1.2
2,928,996	+		ABID97_RS14100	0.62	-0.1
2,928,996	+		ABID97_RS14100	0.62	-1.7
2,928,997	-		ABID97_RS14100	0.62	-0.5
2,928,997	-		ABID97_RS14100	0.62	-2.2
2,928,997	-		ABID97_RS14100	0.62	-1.4
2,929,027	+		ABID97_RS14100	0.63	-2.2
2,929,027	+		ABID97_RS14100	0.63	-1.6
2,929,027	+		ABID97_RS14100	0.63	-1.6
2,929,027	+		ABID97_RS14100	0.63	-0.7
2,929,028	-		ABID97_RS14100	0.63	-0.7
2,929,028	-		ABID97_RS14100	0.63	-0.3
2,929,028	-		ABID97_RS14100	0.63	-0.7
2,929,028	-		ABID97_RS14100	0.63	-1.4
2,929,030	+		ABID97_RS14100	0.63	-2.0
2,929,030	+		ABID97_RS14100	0.63	+0.9
2,929,030	+		ABID97_RS14100	0.63	-2.0
2,929,030	+		ABID97_RS14100	0.63	-1.1
2,929,030	+		ABID97_RS14100	0.63	-3.8
2,929,031	-		ABID97_RS14100	0.63	-0.5
2,929,031	-		ABID97_RS14100	0.63	-2.8
2,929,150	+		ABID97_RS14100	0.67	-1.6
2,929,151	-		ABID97_RS14100	0.67	-1.0
2,929,156	+		ABID97_RS14100	0.67	-0.5
2,929,157	-		ABID97_RS14100	0.67	-0.5
2,929,157	-		ABID97_RS14100	0.67	+0.2
2,929,157	-		ABID97_RS14100	0.67	-2.3
2,929,157	-		ABID97_RS14100	0.67	-2.3
2,929,157	-		ABID97_RS14100	0.67	-1.5
2,929,157	-		ABID97_RS14100	0.67	-2.5
2,929,160	-		ABID97_RS14100	0.68	-0.7
2,929,160	-		ABID97_RS14100	0.68	-1.8
2,929,336	+		ABID97_RS14100	0.74	-1.1
2,929,336	+		ABID97_RS14100	0.74	-0.3
2,929,337	-		ABID97_RS14100	0.74	-0.8
2,929,417	+		ABID97_RS14100	0.77	-2.2
2,929,417	+		ABID97_RS14100	0.77	-1.5
2,929,417	+		ABID97_RS14100	0.77	-2.3
2,929,417	+		ABID97_RS14100	0.77	-0.8
2,929,420	+		ABID97_RS14100	0.77	-0.5
2,929,420	+		ABID97_RS14100	0.77	-1.7
2,929,421	-		ABID97_RS14100	0.77	-3.2
2,929,421	-		ABID97_RS14100	0.77	-2.7
2,929,423	+		ABID97_RS14100	0.77	-1.5
2,929,447	+		ABID97_RS14100	0.78	-1.6
2,929,501	+		ABID97_RS14100	0.80	-1.5
2,929,501	+		ABID97_RS14100	0.80	-0.9
2,929,502	-		ABID97_RS14100	0.80	-2.4
2,929,502	-		ABID97_RS14100	0.80	-2.0
2,929,502	-		ABID97_RS14100	0.80	-1.4
2,929,586	-		ABID97_RS14100	0.83	-3.4
2,929,783	+				-1.2
2,929,783	+				-2.2
2,929,783	+				+0.1
2,929,837	+				-1.4
2,929,837	+				-0.1
2,929,918	+				-0.7
2,929,918	+				-0.5
2,929,918	+				-1.4
2,929,918	+				-0.8
2,929,918	+				+1.0
2,929,919	-				-2.1
2,929,919	-				-0.2
2,929,999	+				-2.1
2,929,999	+				-0.5
2,930,000	-				-2.1
2,930,000	-				-1.4
2,930,032	+				-1.0
2,930,032	+				-1.1
2,930,033	-				-1.5