Experiment: NP
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS07085 and ABID97_RS07090 overlap by 14 nucleotides ABID97_RS07090 and ABID97_RS07095 are separated by 244 nucleotides ABID97_RS07095 and ABID97_RS07100 are separated by 2 nucleotides
ABID97_RS07085: ABID97_RS07085 - HAD family phosphatase, at 1,501,630 to 1,502,271
_RS07085
ABID97_RS07090: ABID97_RS07090 - lipocalin family protein, at 1,502,258 to 1,502,935
_RS07090
ABID97_RS07095: ABID97_RS07095 - transaldolase, at 1,503,180 to 1,504,139
_RS07095
ABID97_RS07100: ABID97_RS07100 - glucose-6-phosphate isomerase, at 1,504,142 to 1,505,707
_RS07100
Position (kb) 1503
1504
1505 Strain fitness (log2 ratio) -1
0
1 at 1502.259 kb on + strand at 1502.260 kb on - strand at 1502.373 kb on + strand, within ABID97_RS07090 at 1502.373 kb on + strand, within ABID97_RS07090 at 1502.373 kb on + strand, within ABID97_RS07090 at 1502.409 kb on + strand, within ABID97_RS07090 at 1502.436 kb on + strand, within ABID97_RS07090 at 1502.436 kb on + strand, within ABID97_RS07090 at 1502.619 kb on + strand, within ABID97_RS07090 at 1502.620 kb on - strand, within ABID97_RS07090 at 1502.697 kb on + strand, within ABID97_RS07090 at 1502.697 kb on + strand, within ABID97_RS07090 at 1502.697 kb on + strand, within ABID97_RS07090 at 1502.698 kb on - strand, within ABID97_RS07090 at 1503.034 kb on + strand at 1503.034 kb on + strand at 1503.103 kb on - strand at 1503.103 kb on - strand at 1503.169 kb on + strand at 1503.513 kb on + strand, within ABID97_RS07095 at 1503.513 kb on + strand, within ABID97_RS07095 at 1503.513 kb on + strand, within ABID97_RS07095 at 1503.514 kb on - strand, within ABID97_RS07095 at 1503.708 kb on + strand, within ABID97_RS07095 at 1503.708 kb on + strand, within ABID97_RS07095 at 1503.709 kb on - strand, within ABID97_RS07095 at 1503.717 kb on + strand, within ABID97_RS07095 at 1503.717 kb on + strand, within ABID97_RS07095 at 1503.717 kb on + strand, within ABID97_RS07095 at 1503.718 kb on - strand, within ABID97_RS07095 at 1503.808 kb on - strand, within ABID97_RS07095 at 1503.810 kb on + strand, within ABID97_RS07095 at 1503.811 kb on - strand, within ABID97_RS07095 at 1503.811 kb on - strand, within ABID97_RS07095 at 1503.811 kb on - strand, within ABID97_RS07095 at 1504.138 kb on - strand at 1504.138 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NP remove 1,502,259 + -0.1 1,502,260 - +0.3 1,502,373 + ABID97_RS07090 0.17 +0.7 1,502,373 + ABID97_RS07090 0.17 +0.3 1,502,373 + ABID97_RS07090 0.17 -0.0 1,502,409 + ABID97_RS07090 0.22 +0.0 1,502,436 + ABID97_RS07090 0.26 +0.2 1,502,436 + ABID97_RS07090 0.26 +0.0 1,502,619 + ABID97_RS07090 0.53 +0.1 1,502,620 - ABID97_RS07090 0.53 +0.4 1,502,697 + ABID97_RS07090 0.65 -0.0 1,502,697 + ABID97_RS07090 0.65 +1.6 1,502,697 + ABID97_RS07090 0.65 +1.4 1,502,698 - ABID97_RS07090 0.65 +0.3 1,503,034 + +0.0 1,503,034 + +0.3 1,503,103 - -0.7 1,503,103 - +0.1 1,503,169 + -0.6 1,503,513 + ABID97_RS07095 0.35 -0.9 1,503,513 + ABID97_RS07095 0.35 -0.1 1,503,513 + ABID97_RS07095 0.35 -0.2 1,503,514 - ABID97_RS07095 0.35 +0.2 1,503,708 + ABID97_RS07095 0.55 -0.2 1,503,708 + ABID97_RS07095 0.55 -0.0 1,503,709 - ABID97_RS07095 0.55 -0.8 1,503,717 + ABID97_RS07095 0.56 -0.0 1,503,717 + ABID97_RS07095 0.56 +0.2 1,503,717 + ABID97_RS07095 0.56 -1.0 1,503,718 - ABID97_RS07095 0.56 -0.4 1,503,808 - ABID97_RS07095 0.65 +0.2 1,503,810 + ABID97_RS07095 0.66 -0.3 1,503,811 - ABID97_RS07095 0.66 -0.0 1,503,811 - ABID97_RS07095 0.66 -1.0 1,503,811 - ABID97_RS07095 0.66 -0.2 1,504,138 - -0.2 1,504,138 - +0.2
Or see this region's nucleotide sequence