Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3558

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,005,801	+				+0.7
4,005,820	+				-1.5
4,005,833	+				+0.2
4,005,848	-				+0.4
4,005,895	-				-0.4
4,005,983	+		PfGW456L13_3557	0.13	+1.3
4,005,983	+		PfGW456L13_3557	0.13	+0.9
4,005,984	-		PfGW456L13_3557	0.13	+1.4
4,006,004	+		PfGW456L13_3557	0.16	-1.2
4,006,048	+		PfGW456L13_3557	0.23	-0.5
4,006,301	-		PfGW456L13_3557	0.63	+0.3
4,006,301	-		PfGW456L13_3557	0.63	+3.8
4,006,302	+				+2.3
4,006,302	+		PfGW456L13_3557	0.63	+2.0
4,006,303	-		PfGW456L13_3557	0.64	-0.7
4,006,303	-		PfGW456L13_3557	0.64	+0.9
4,006,454	+		PfGW456L13_3557	0.88	+1.0
4,006,454	+		PfGW456L13_3557	0.88	-0.8
4,006,455	-		PfGW456L13_3557	0.88	-0.2
4,006,482	+				+0.2
4,006,490	+				-1.3
4,006,491	-				-1.1
4,006,491	-				-0.9
4,006,491	-				+0.4
4,006,491	-				+0.3
4,006,497	-				+1.7
4,006,566	+				-0.4
4,006,567	-				+0.6
4,006,725	-				-0.3
4,006,725	-				-0.5
4,006,758	-				+0.3
4,006,808	-				+1.0
4,006,808	-				-1.3
4,007,311	+		PfGW456L13_3558	0.34	-1.4
4,007,525	+		PfGW456L13_3558	0.45	+0.5
4,007,646	+		PfGW456L13_3558	0.52	+0.5
4,007,647	-		PfGW456L13_3558	0.52	+1.3
4,007,647	-		PfGW456L13_3558	0.52	-1.0
4,007,782	+		PfGW456L13_3558	0.60	-1.0
4,007,783	-		PfGW456L13_3558	0.60	-0.6
4,008,064	+		PfGW456L13_3558	0.75	-1.4
4,008,065	-		PfGW456L13_3558	0.75	+1.5
4,008,121	+		PfGW456L13_3558	0.78	-0.5
4,008,281	-		PfGW456L13_3558	0.87	-1.2
4,008,406	+				+0.2
4,008,406	+				+0.7
4,008,407	-				+0.8
4,008,407	-				+1.0
4,008,589	+				-1.4
4,008,590	-				+0.1
4,008,590	-				+0.8
4,008,590	-				+0.5
4,008,659	+				+2.3
4,008,890	+		PfGW456L13_3559	0.19	-2.7
4,008,890	+		PfGW456L13_3559	0.19	-1.0
4,008,890	+		PfGW456L13_3559	0.19	-1.6
4,008,890	+		PfGW456L13_3559	0.19	-2.1
4,008,891	-		PfGW456L13_3559	0.19	+0.5
4,008,968	+		PfGW456L13_3559	0.26	-0.3
4,008,969	-		PfGW456L13_3559	0.26	+0.2
4,008,969	-		PfGW456L13_3559	0.26	-0.8
4,008,969	-		PfGW456L13_3559	0.26	-0.4
4,008,969	-		PfGW456L13_3559	0.26	+0.5
4,008,969	-		PfGW456L13_3559	0.26	-0.3
4,008,981	-		PfGW456L13_3559	0.27	-2.4
4,008,981	-		PfGW456L13_3559	0.27	-0.2
4,009,022	+		PfGW456L13_3559	0.31	-1.3
4,009,022	+		PfGW456L13_3559	0.31	-0.3
4,009,023	-		PfGW456L13_3559	0.31	-0.5
4,009,023	-		PfGW456L13_3559	0.31	+0.1
4,009,023	-		PfGW456L13_3559	0.31	+0.1
4,009,259	+		PfGW456L13_3559	0.52	-0.3
4,009,259	+		PfGW456L13_3559	0.52	+0.9
4,009,260	-		PfGW456L13_3559	0.52	+0.9
4,009,260	-		PfGW456L13_3559	0.52	+0.8
4,009,260	-		PfGW456L13_3559	0.52	+0.8
4,009,263	+		PfGW456L13_3559	0.53	+0.0
4,009,264	-		PfGW456L13_3559	0.53	-0.4
4,009,264	-		PfGW456L13_3559	0.53	-2.3
4,009,264	-		PfGW456L13_3559	0.53	+1.3
4,009,264	-		PfGW456L13_3559	0.53	-0.9
4,009,264	-		PfGW456L13_3559	0.53	+0.1
4,009,264	-		PfGW456L13_3559	0.53	+1.4
4,009,470	+		PfGW456L13_3559	0.71	-0.8
4,009,471	-		PfGW456L13_3559	0.71	-0.2