Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_283 and PfGW456L13_284 are separated by 183 nucleotides PfGW456L13_284 and PfGW456L13_285 are separated by 35 nucleotides PfGW456L13_285 and PfGW456L13_286 are separated by 289 nucleotides
PfGW456L13_283 - NADP-dependent malic enzyme (EC 1.1.1.40), at 332,332 to 333,600
_283
PfGW456L13_284 - Thermonuclease family protein, at 333,784 to 334,572
_284
PfGW456L13_285 - LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent, at 334,608 to 334,826
_285
PfGW456L13_286 - Helicase PriA essential for oriC/DnaA-independent DNA replication, at 335,116 to 337,335
_286
Position (kb) 333
334
335 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 332.900 kb on + strand, within PfGW456L13_283 at 332.900 kb on + strand, within PfGW456L13_283 at 332.901 kb on - strand, within PfGW456L13_283 at 332.901 kb on - strand, within PfGW456L13_283 at 332.901 kb on - strand, within PfGW456L13_283 at 332.901 kb on - strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.954 kb on + strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.955 kb on - strand, within PfGW456L13_283 at 332.984 kb on - strand, within PfGW456L13_283 at 332.984 kb on - strand, within PfGW456L13_283 at 333.138 kb on + strand, within PfGW456L13_283 at 333.317 kb on - strand, within PfGW456L13_283 at 333.425 kb on + strand, within PfGW456L13_283 at 333.425 kb on + strand, within PfGW456L13_283 at 333.426 kb on - strand, within PfGW456L13_283 at 333.426 kb on - strand, within PfGW456L13_283 at 333.426 kb on - strand, within PfGW456L13_283 at 333.426 kb on - strand, within PfGW456L13_283 at 333.426 kb on - strand, within PfGW456L13_283 at 333.431 kb on + strand, within PfGW456L13_283 at 333.570 kb on - strand at 333.619 kb on - strand at 333.741 kb on + strand at 333.931 kb on - strand, within PfGW456L13_284 at 333.968 kb on - strand, within PfGW456L13_284 at 333.968 kb on - strand, within PfGW456L13_284 at 333.982 kb on + strand, within PfGW456L13_284 at 333.983 kb on - strand, within PfGW456L13_284 at 334.079 kb on - strand, within PfGW456L13_284 at 334.235 kb on + strand, within PfGW456L13_284 at 334.236 kb on - strand, within PfGW456L13_284 at 334.236 kb on - strand, within PfGW456L13_284 at 334.236 kb on - strand, within PfGW456L13_284 at 334.236 kb on - strand, within PfGW456L13_284 at 334.534 kb on - strand at 334.534 kb on - strand at 334.657 kb on - strand, within PfGW456L13_285 at 334.950 kb on + strand at 334.950 kb on + strand at 334.950 kb on + strand at 334.951 kb on - strand at 334.951 kb on - strand at 334.951 kb on - strand at 335.020 kb on + strand at 335.020 kb on + strand at 335.020 kb on + strand at 335.021 kb on - strand at 335.021 kb on - strand at 335.021 kb on - strand at 335.090 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 332,900 + PfGW456L13_283 0.45 -1.1 332,900 + PfGW456L13_283 0.45 +0.1 332,901 - PfGW456L13_283 0.45 +0.5 332,901 - PfGW456L13_283 0.45 -1.3 332,901 - PfGW456L13_283 0.45 -1.6 332,901 - PfGW456L13_283 0.45 -0.9 332,954 + PfGW456L13_283 0.49 +1.2 332,954 + PfGW456L13_283 0.49 +0.3 332,954 + PfGW456L13_283 0.49 -0.5 332,954 + PfGW456L13_283 0.49 +0.2 332,954 + PfGW456L13_283 0.49 +0.9 332,954 + PfGW456L13_283 0.49 -0.8 332,954 + PfGW456L13_283 0.49 -0.2 332,954 + PfGW456L13_283 0.49 -0.6 332,954 + PfGW456L13_283 0.49 +0.9 332,954 + PfGW456L13_283 0.49 +1.0 332,954 + PfGW456L13_283 0.49 -0.4 332,955 - PfGW456L13_283 0.49 +2.5 332,955 - PfGW456L13_283 0.49 +0.9 332,955 - PfGW456L13_283 0.49 -0.2 332,955 - PfGW456L13_283 0.49 -1.2 332,955 - PfGW456L13_283 0.49 +1.5 332,955 - PfGW456L13_283 0.49 -0.5 332,984 - PfGW456L13_283 0.51 -0.7 332,984 - PfGW456L13_283 0.51 +0.9 333,138 + PfGW456L13_283 0.64 +0.7 333,317 - PfGW456L13_283 0.78 -1.7 333,425 + PfGW456L13_283 0.86 -0.7 333,425 + PfGW456L13_283 0.86 -0.2 333,426 - PfGW456L13_283 0.86 -0.3 333,426 - PfGW456L13_283 0.86 +0.7 333,426 - PfGW456L13_283 0.86 -1.0 333,426 - PfGW456L13_283 0.86 -3.0 333,426 - PfGW456L13_283 0.86 -0.8 333,431 + PfGW456L13_283 0.87 -1.4 333,570 - +0.7 333,619 - +0.6 333,741 + +1.2 333,931 - PfGW456L13_284 0.19 +0.6 333,968 - PfGW456L13_284 0.23 -0.0 333,968 - PfGW456L13_284 0.23 -0.7 333,982 + PfGW456L13_284 0.25 -1.5 333,983 - PfGW456L13_284 0.25 +1.3 334,079 - PfGW456L13_284 0.37 -1.6 334,235 + PfGW456L13_284 0.57 +0.2 334,236 - PfGW456L13_284 0.57 +0.6 334,236 - PfGW456L13_284 0.57 -2.3 334,236 - PfGW456L13_284 0.57 -0.7 334,236 - PfGW456L13_284 0.57 -1.6 334,534 - -0.8 334,534 - -0.7 334,657 - PfGW456L13_285 0.22 +0.9 334,950 + +0.9 334,950 + -0.5 334,950 + -0.1 334,951 - -2.0 334,951 - -0.3 334,951 - +0.4 335,020 + +1.5 335,020 + -0.8 335,020 + +0.4 335,021 - +0.9 335,021 - -0.8 335,021 - -0.7 335,090 - +2.5
Or see this region's nucleotide sequence