Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2416 and PfGW456L13_2417 overlap by 4 nucleotides PfGW456L13_2417 and PfGW456L13_2418 are separated by 86 nucleotides PfGW456L13_2418 and PfGW456L13_2419 are separated by 615 nucleotides
PfGW456L13_2416 - Mobile element protein, at 2,680,353 to 2,681,189
_2416
PfGW456L13_2417 - Mobile element protein, at 2,681,186 to 2,681,491
_2417
PfGW456L13_2418 - hypothetical protein, at 2,681,578 to 2,681,892
_2418
PfGW456L13_2419 - Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ, at 2,682,508 to 2,684,577
_2419
Position (kb)
2681
2682 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2681.542 kb on + strand at 2681.545 kb on + strand at 2681.567 kb on + strand at 2681.741 kb on + strand, within PfGW456L13_2418 at 2681.962 kb on + strand at 2681.962 kb on + strand at 2681.963 kb on - strand at 2681.963 kb on - strand at 2681.963 kb on - strand at 2681.963 kb on - strand at 2681.963 kb on - strand at 2681.963 kb on - strand at 2682.019 kb on + strand at 2682.019 kb on + strand at 2682.019 kb on + strand at 2682.020 kb on - strand at 2682.020 kb on - strand at 2682.020 kb on - strand at 2682.043 kb on - strand at 2682.043 kb on - strand at 2682.112 kb on - strand at 2682.232 kb on + strand at 2682.364 kb on - strand at 2682.458 kb on - strand at 2682.545 kb on + strand at 2682.545 kb on + strand at 2682.546 kb on - strand at 2682.546 kb on - strand at 2682.546 kb on - strand at 2682.722 kb on + strand, within PfGW456L13_2419 at 2682.722 kb on + strand, within PfGW456L13_2419 at 2682.722 kb on + strand, within PfGW456L13_2419 at 2682.723 kb on - strand, within PfGW456L13_2419 at 2682.788 kb on + strand, within PfGW456L13_2419 at 2682.789 kb on - strand, within PfGW456L13_2419 at 2682.789 kb on - strand, within PfGW456L13_2419 at 2682.851 kb on + strand, within PfGW456L13_2419 at 2682.852 kb on - strand, within PfGW456L13_2419 at 2682.852 kb on - strand, within PfGW456L13_2419 at 2682.852 kb on - strand, within PfGW456L13_2419 at 2682.852 kb on - strand, within PfGW456L13_2419
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,681,542 + +0.7 2,681,545 + -1.3 2,681,567 + -0.9 2,681,741 + PfGW456L13_2418 0.52 -0.8 2,681,962 + +2.2 2,681,962 + -0.1 2,681,963 - +3.1 2,681,963 - -0.5 2,681,963 - -0.6 2,681,963 - +0.1 2,681,963 - -1.0 2,681,963 - -0.3 2,682,019 + +0.3 2,682,019 + +0.2 2,682,019 + +0.5 2,682,020 - -0.7 2,682,020 - -1.5 2,682,020 - -0.1 2,682,043 - +1.4 2,682,043 - -0.5 2,682,112 - -0.1 2,682,232 + +0.3 2,682,364 - -0.5 2,682,458 - -1.4 2,682,545 + +0.0 2,682,545 + +0.4 2,682,546 - +0.8 2,682,546 - -0.4 2,682,546 - -0.5 2,682,722 + PfGW456L13_2419 0.10 -1.9 2,682,722 + PfGW456L13_2419 0.10 -0.1 2,682,722 + PfGW456L13_2419 0.10 +1.1 2,682,723 - PfGW456L13_2419 0.10 -0.7 2,682,788 + PfGW456L13_2419 0.14 -0.3 2,682,789 - PfGW456L13_2419 0.14 +0.3 2,682,789 - PfGW456L13_2419 0.14 -0.0 2,682,851 + PfGW456L13_2419 0.17 -0.3 2,682,852 - PfGW456L13_2419 0.17 +0.0 2,682,852 - PfGW456L13_2419 0.17 -0.1 2,682,852 - PfGW456L13_2419 0.17 +0.1 2,682,852 - PfGW456L13_2419 0.17 +0.3
Or see this region's nucleotide sequence