Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1389

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,535,846	+		PfGW456L13_1388	0.39	-1.0
1,535,846	+		PfGW456L13_1388	0.39	-0.3
1,535,846	+		PfGW456L13_1388	0.39	-0.7
1,535,847	-		PfGW456L13_1388	0.39	-0.1
1,535,847	-		PfGW456L13_1388	0.39	-0.8
1,535,847	-		PfGW456L13_1388	0.39	+0.1
1,535,847	-		PfGW456L13_1388	0.39	-0.9
1,535,847	-		PfGW456L13_1388	0.39	-3.0
1,535,847	-		PfGW456L13_1388	0.39	+0.0
1,535,847	-		PfGW456L13_1388	0.39	+1.7
1,535,847	-		PfGW456L13_1388	0.39	-0.7
1,535,897	+		PfGW456L13_1388	0.43	+3.5
1,535,897	+		PfGW456L13_1388	0.43	-0.0
1,535,897	+		PfGW456L13_1388	0.43	-1.0
1,535,897	+		PfGW456L13_1388	0.43	-1.3
1,535,898	-		PfGW456L13_1388	0.43	-2.0
1,535,898	-		PfGW456L13_1388	0.43	-0.8
1,535,898	-		PfGW456L13_1388	0.43	+0.2
1,535,898	-		PfGW456L13_1388	0.43	+0.5
1,535,906	+		PfGW456L13_1388	0.43	-1.2
1,535,906	+		PfGW456L13_1388	0.43	+1.4
1,535,906	+		PfGW456L13_1388	0.43	-0.2
1,535,907	-		PfGW456L13_1388	0.43	-1.1
1,536,236	+		PfGW456L13_1388	0.66	-0.4
1,536,236	+		PfGW456L13_1388	0.66	+0.9
1,536,237	-		PfGW456L13_1388	0.66	-0.1
1,536,237	-		PfGW456L13_1388	0.66	+0.7
1,536,254	+		PfGW456L13_1388	0.67	+0.9
1,536,254	+		PfGW456L13_1388	0.67	+0.9
1,536,254	+		PfGW456L13_1388	0.67	+0.0
1,536,254	+		PfGW456L13_1388	0.67	-1.0
1,536,254	+		PfGW456L13_1388	0.67	-0.9
1,536,254	+		PfGW456L13_1388	0.67	+0.8
1,536,255	-		PfGW456L13_1388	0.67	+1.4
1,536,255	-		PfGW456L13_1388	0.67	+0.7
1,536,255	-		PfGW456L13_1388	0.67	-0.8
1,536,255	-		PfGW456L13_1388	0.67	-2.5
1,536,417	-		PfGW456L13_1388	0.78	+3.9
1,536,428	-		PfGW456L13_1388	0.79	-0.4
1,536,617	+				+1.3
1,536,617	+				-1.1
1,536,617	+				+0.6
1,536,617	+				+0.4
1,536,617	+				+1.9
1,536,618	-				+1.4
1,536,618	-				+0.9
1,536,618	-				+0.9
1,536,618	-				+0.1
1,536,618	-				+0.6
1,536,773	+				-0.1
1,536,774	-				+0.3
1,536,774	-				+0.1
1,536,774	-				-0.3
1,536,774	-				+1.2
1,536,780	-				-0.1
1,536,795	+				+1.2
1,536,795	+				+0.0
1,536,796	-				-0.5
1,536,796	-				+0.4
1,536,986	+		PfGW456L13_1389	0.27	-0.2
1,536,986	+		PfGW456L13_1389	0.27	+0.3
1,536,987	-		PfGW456L13_1389	0.28	-0.4
1,536,987	-		PfGW456L13_1389	0.28	-0.4
1,536,987	-		PfGW456L13_1389	0.28	-0.2
1,536,987	-		PfGW456L13_1389	0.28	-1.3
1,536,987	-		PfGW456L13_1389	0.28	+0.3
1,536,987	-		PfGW456L13_1389	0.28	+0.1
1,536,996	+		PfGW456L13_1389	0.29	-0.4
1,536,996	+		PfGW456L13_1389	0.29	+2.1
1,536,997	-		PfGW456L13_1389	0.29	-0.5
1,537,007	+		PfGW456L13_1389	0.31	-0.4
1,537,008	-		PfGW456L13_1389	0.31	-2.5
1,537,115	+		PfGW456L13_1389	0.48	-1.0
1,537,115	+		PfGW456L13_1389	0.48	+0.0
1,537,115	+		PfGW456L13_1389	0.48	-1.4
1,537,115	+		PfGW456L13_1389	0.48	-1.3
1,537,115	+		PfGW456L13_1389	0.48	-0.3
1,537,115	+		PfGW456L13_1389	0.48	+0.5
1,537,115	+		PfGW456L13_1389	0.48	+0.8
1,537,116	-		PfGW456L13_1389	0.48	-1.9
1,537,116	-		PfGW456L13_1389	0.48	-0.6
1,537,116	-		PfGW456L13_1389	0.48	-1.5
1,537,431	+				-1.1
1,537,445	+				-1.7
1,537,445	+				+0.1
1,537,445	+				-0.9
1,537,445	+				+1.8
1,537,445	+				-1.2
1,537,445	+				-0.3
1,537,677	+				-1.7
1,537,694	+				+0.1
1,537,695	-				-0.8
1,537,695	-				+0.9
1,537,695	-				+0.9
1,537,697	-				+0.1
1,537,697	-				+0.1
1,537,720	-				-0.5
1,537,825	+				+1.3
1,537,825	+				-0.4
1,537,825	+				-0.9
1,537,826	-				-1.3
1,537,987	-		PfGW456L13_1391	0.25	-0.1
1,537,987	-		PfGW456L13_1391	0.25	-2.6
1,538,022	+		PfGW456L13_1391	0.33	+0.1
1,538,314	+				-0.7
1,538,384	-				-0.5