Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1369 and PfGW456L13_1370 are separated by 217 nucleotides PfGW456L13_1370 and PfGW456L13_1371 are separated by 209 nucleotides
PfGW456L13_1369 - Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-), at 1,513,396 to 1,514,562
_1369
PfGW456L13_1370 - FIG00957593: hypothetical protein, at 1,514,780 to 1,514,944
_1370
PfGW456L13_1371 - DNA polymerase III delta subunit (EC 2.7.7.7), at 1,515,154 to 1,516,191
_1371
Position (kb)
1514
1515 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1513.861 kb on + strand, within PfGW456L13_1369 at 1513.861 kb on + strand, within PfGW456L13_1369 at 1513.861 kb on + strand, within PfGW456L13_1369 at 1513.861 kb on + strand, within PfGW456L13_1369 at 1513.861 kb on + strand, within PfGW456L13_1369 at 1513.862 kb on - strand, within PfGW456L13_1369 at 1513.862 kb on - strand, within PfGW456L13_1369 at 1513.862 kb on - strand, within PfGW456L13_1369 at 1513.862 kb on - strand, within PfGW456L13_1369 at 1513.862 kb on - strand, within PfGW456L13_1369 at 1513.862 kb on - strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.865 kb on + strand, within PfGW456L13_1369 at 1513.866 kb on - strand, within PfGW456L13_1369 at 1513.866 kb on - strand, within PfGW456L13_1369 at 1513.866 kb on - strand, within PfGW456L13_1369 at 1513.866 kb on - strand, within PfGW456L13_1369 at 1513.866 kb on - strand, within PfGW456L13_1369 at 1513.866 kb on - strand, within PfGW456L13_1369 at 1513.866 kb on - strand, within PfGW456L13_1369 at 1513.937 kb on + strand, within PfGW456L13_1369 at 1513.937 kb on + strand, within PfGW456L13_1369 at 1513.938 kb on - strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.024 kb on + strand, within PfGW456L13_1369 at 1514.025 kb on - strand, within PfGW456L13_1369 at 1514.025 kb on - strand, within PfGW456L13_1369 at 1514.025 kb on - strand, within PfGW456L13_1369 at 1514.025 kb on - strand, within PfGW456L13_1369 at 1514.025 kb on - strand, within PfGW456L13_1369 at 1514.025 kb on - strand, within PfGW456L13_1369 at 1514.025 kb on - strand, within PfGW456L13_1369 at 1514.165 kb on + strand, within PfGW456L13_1369 at 1514.166 kb on - strand, within PfGW456L13_1369 at 1514.363 kb on + strand, within PfGW456L13_1369 at 1514.364 kb on - strand, within PfGW456L13_1369 at 1514.686 kb on + strand at 1514.686 kb on + strand at 1514.686 kb on + strand at 1514.686 kb on + strand at 1514.687 kb on - strand at 1514.687 kb on - strand at 1514.687 kb on - strand at 1514.687 kb on - strand at 1514.687 kb on - strand at 1514.735 kb on + strand at 1514.735 kb on + strand at 1514.746 kb on + strand at 1514.755 kb on + strand at 1514.756 kb on - strand at 1514.756 kb on - strand at 1514.796 kb on + strand at 1514.796 kb on + strand at 1514.797 kb on - strand, within PfGW456L13_1370 at 1514.797 kb on - strand, within PfGW456L13_1370 at 1514.797 kb on - strand, within PfGW456L13_1370 at 1514.797 kb on - strand, within PfGW456L13_1370 at 1514.839 kb on - strand, within PfGW456L13_1370 at 1515.009 kb on + strand at 1515.009 kb on + strand at 1515.009 kb on + strand at 1515.010 kb on - strand at 1515.010 kb on - strand at 1515.010 kb on - strand at 1515.010 kb on - strand at 1515.018 kb on + strand at 1515.018 kb on + strand at 1515.018 kb on - strand at 1515.019 kb on - strand at 1515.019 kb on - strand at 1515.140 kb on + strand at 1515.141 kb on - strand at 1515.155 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,513,861 + PfGW456L13_1369 0.40 +0.7 1,513,861 + PfGW456L13_1369 0.40 -0.9 1,513,861 + PfGW456L13_1369 0.40 -0.4 1,513,861 + PfGW456L13_1369 0.40 -0.1 1,513,861 + PfGW456L13_1369 0.40 +0.8 1,513,862 - PfGW456L13_1369 0.40 +1.6 1,513,862 - PfGW456L13_1369 0.40 +1.6 1,513,862 - PfGW456L13_1369 0.40 -0.4 1,513,862 - PfGW456L13_1369 0.40 -0.2 1,513,862 - PfGW456L13_1369 0.40 +0.8 1,513,862 - PfGW456L13_1369 0.40 -1.2 1,513,865 + PfGW456L13_1369 0.40 -0.2 1,513,865 + PfGW456L13_1369 0.40 -1.3 1,513,865 + PfGW456L13_1369 0.40 -0.4 1,513,865 + PfGW456L13_1369 0.40 -0.6 1,513,865 + PfGW456L13_1369 0.40 +0.9 1,513,865 + PfGW456L13_1369 0.40 +2.2 1,513,865 + PfGW456L13_1369 0.40 -0.1 1,513,865 + PfGW456L13_1369 0.40 -1.5 1,513,865 + PfGW456L13_1369 0.40 -2.1 1,513,865 + PfGW456L13_1369 0.40 -0.9 1,513,865 + PfGW456L13_1369 0.40 +1.4 1,513,866 - PfGW456L13_1369 0.40 -0.4 1,513,866 - PfGW456L13_1369 0.40 +2.2 1,513,866 - PfGW456L13_1369 0.40 +0.8 1,513,866 - PfGW456L13_1369 0.40 -0.5 1,513,866 - PfGW456L13_1369 0.40 -0.4 1,513,866 - PfGW456L13_1369 0.40 +0.5 1,513,866 - PfGW456L13_1369 0.40 -0.1 1,513,937 + PfGW456L13_1369 0.46 +1.1 1,513,937 + PfGW456L13_1369 0.46 -0.6 1,513,938 - PfGW456L13_1369 0.46 +0.3 1,514,024 + PfGW456L13_1369 0.54 +0.6 1,514,024 + PfGW456L13_1369 0.54 -1.7 1,514,024 + PfGW456L13_1369 0.54 +0.0 1,514,024 + PfGW456L13_1369 0.54 -0.5 1,514,024 + PfGW456L13_1369 0.54 -1.6 1,514,024 + PfGW456L13_1369 0.54 +0.1 1,514,024 + PfGW456L13_1369 0.54 -0.7 1,514,024 + PfGW456L13_1369 0.54 -0.3 1,514,024 + PfGW456L13_1369 0.54 +0.0 1,514,024 + PfGW456L13_1369 0.54 +0.7 1,514,024 + PfGW456L13_1369 0.54 +0.3 1,514,025 - PfGW456L13_1369 0.54 -0.0 1,514,025 - PfGW456L13_1369 0.54 -0.0 1,514,025 - PfGW456L13_1369 0.54 +1.9 1,514,025 - PfGW456L13_1369 0.54 -0.5 1,514,025 - PfGW456L13_1369 0.54 +0.5 1,514,025 - PfGW456L13_1369 0.54 +0.5 1,514,025 - PfGW456L13_1369 0.54 +0.4 1,514,165 + PfGW456L13_1369 0.66 -0.9 1,514,166 - PfGW456L13_1369 0.66 +1.4 1,514,363 + PfGW456L13_1369 0.83 -0.8 1,514,364 - PfGW456L13_1369 0.83 -1.7 1,514,686 + -1.0 1,514,686 + +1.1 1,514,686 + +0.2 1,514,686 + -0.0 1,514,687 - +1.3 1,514,687 - -0.6 1,514,687 - +1.3 1,514,687 - +0.2 1,514,687 - -0.1 1,514,735 + -0.8 1,514,735 + -1.4 1,514,746 + -0.2 1,514,755 + -0.3 1,514,756 - +0.3 1,514,756 - +0.1 1,514,796 + -0.9 1,514,796 + -1.8 1,514,797 - PfGW456L13_1370 0.10 -0.1 1,514,797 - PfGW456L13_1370 0.10 +1.5 1,514,797 - PfGW456L13_1370 0.10 -1.1 1,514,797 - PfGW456L13_1370 0.10 -0.8 1,514,839 - PfGW456L13_1370 0.36 -0.9 1,515,009 + -0.6 1,515,009 + +0.3 1,515,009 + +0.5 1,515,010 - +1.2 1,515,010 - -0.9 1,515,010 - -0.4 1,515,010 - +0.9 1,515,018 + +0.9 1,515,018 + +0.1 1,515,018 - -0.8 1,515,019 - +0.5 1,515,019 - +0.7 1,515,140 + +1.3 1,515,141 - -2.0 1,515,155 + -0.7
Or see this region's nucleotide sequence