Strain Fitness in Agrobacterium fabrum C58 around Atu4098

Experiment: R2A with silver chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with silver chloride 5 mM
1,217,036	-		Atu4097	0.43	+0.5
1,217,125	-		Atu4097	0.48	-0.5
1,217,137	-		Atu4097	0.49	-0.1
1,217,233	+		Atu4097	0.55	-0.3
1,217,330	-		Atu4097	0.61	+0.0
1,217,408	+		Atu4097	0.66	+0.1
1,217,421	-		Atu4097	0.67	-0.8
1,217,448	-		Atu4097	0.69	+0.2
1,217,470	-		Atu4097	0.70	+0.2
1,217,470	-		Atu4097	0.70	+1.4
1,217,470	-		Atu4097	0.70	-1.4
1,217,480	-		Atu4097	0.71	+0.8
1,217,492	-		Atu4097	0.72	+0.4
1,217,739	+		Atu4097	0.87	+1.4
1,217,747	-		Atu4097	0.88	+0.2
1,217,747	-		Atu4097	0.88	-0.1
1,217,747	-		Atu4097	0.88	-1.2
1,217,747	-		Atu4097	0.88	+0.8
1,217,747	-		Atu4097	0.88	+1.0
1,217,747	-		Atu4097	0.88	+0.0
1,217,762	+		Atu4097	0.89	-0.4
1,218,180	+		Atu4098	0.24	+0.2
1,218,192	-		Atu4098	0.25	-0.1
1,218,278	-		Atu4098	0.33	-0.3
1,218,282	+		Atu4098	0.34	+0.0
1,218,288	-		Atu4098	0.34	-0.4
1,218,290	+		Atu4098	0.34	-0.2
1,218,290	-		Atu4098	0.34	+0.3
1,218,343	+		Atu4098	0.39	-0.3
1,218,458	+		Atu4098	0.51	-0.3
1,218,500	+		Atu4098	0.55	+0.8
1,218,501	-		Atu4098	0.55	-0.4
1,218,533	-		Atu4098	0.58	-0.4
1,218,538	-		Atu4098	0.58	+0.3
1,218,538	-		Atu4098	0.58	+0.2
1,218,545	+		Atu4098	0.59	-0.1
1,218,572	+		Atu4098	0.62	-0.0
1,218,683	-		Atu4098	0.72	+0.1
1,218,711	-		Atu4098	0.75	+0.2
1,218,893	-				+0.6
1,218,893	-				+0.1
1,219,009	+				+0.1
1,219,173	-		Atu4099	0.22	-0.2
1,219,204	-		Atu4099	0.25	+0.4
1,219,332	+		Atu4099	0.40	-0.2
1,219,350	+		Atu4099	0.42	-0.2
1,219,350	+		Atu4099	0.42	+0.1
1,219,499	-		Atu4099	0.58	-0.6
1,219,581	+		Atu4099	0.67	-0.3
1,219,679	-		Atu4099	0.78	-0.3
1,219,679	-		Atu4099	0.78	-0.2
1,219,736	+		Atu4099	0.84	+0.1
1,219,751	+		Atu4099	0.86	-0.2
1,219,826	-				-1.8
1,219,858	+				-0.9
1,219,862	-				-0.5
1,219,879	-				+0.0
1,219,911	-				-1.7