Strain Fitness in Agrobacterium fabrum C58 around Atu2558

Experiment: R2A with bromate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with bromate 5 mM
2,530,118	+				-0.1
2,530,171	-				+0.5
2,530,255	+				-0.3
2,530,526	-		Atu2557	0.56	-0.2
2,530,533	+		Atu2557	0.60	-0.0
2,530,677	-				+0.4
2,530,849	+				+0.6
2,530,860	-				-1.0
2,530,873	+				-0.0
2,530,881	-				-1.5
2,530,881	-				-0.5
2,530,970	+				-0.7
2,531,257	+				+2.6
2,531,257	+				+0.1
2,531,265	-				+0.5
2,531,455	+		Atu2559	0.17	-0.4
2,531,455	+		Atu2559	0.17	+0.6
2,531,470	-		Atu2559	0.18	+0.1
2,531,486	+		Atu2559	0.20	+0.1
2,531,566	+		Atu2559	0.29	-0.1
2,531,589	+		Atu2559	0.31	+0.3
2,531,597	-		Atu2559	0.32	+0.4
2,531,610	+		Atu2559	0.34	+0.1
2,531,638	+		Atu2559	0.37	-0.2
2,531,646	-		Atu2559	0.37	-0.1
2,531,710	-		Atu2559	0.44	-0.1
2,531,710	-		Atu2559	0.44	+0.1
2,531,881	+		Atu2559	0.63	+0.5
2,531,908	+		Atu2559	0.66	+0.2
2,531,963	-		Atu2559	0.72	-0.7
2,532,030	+		Atu2559	0.79	+0.1
2,532,037	+		Atu2559	0.80	+1.2
2,532,068	-		Atu2559	0.83	-0.5
2,532,114	+		Atu2559	0.88	-0.1
2,532,167	+				+0.4