Strain Fitness in Agrobacterium fabrum C58 around Atu2034

Experiment: R2A with bromate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with bromate 5 mM
1,991,922	-		Atu2032	0.61	+0.2
1,991,923	-		Atu2032	0.61	+0.3
1,992,004	+		Atu2032	0.70	+0.6
1,992,026	+		Atu2032	0.73	-0.1
1,992,053	-		Atu2032	0.76	-0.2
1,992,064	+		Atu2032	0.77	+0.3
1,992,087	-		Atu2032	0.80	+1.9
1,992,189	+				+0.3
1,992,228	-				+0.4
1,992,525	+		Atu2033	0.24	+0.4
1,992,576	+		Atu2033	0.34	+0.1
1,992,704	-		Atu2033	0.58	+0.3
1,992,747	+		Atu2033	0.66	+0.2
1,992,751	-		Atu2033	0.67	+0.3
1,992,823	+		Atu2033	0.80	-0.3
1,992,828	+		Atu2033	0.81	-0.8
1,992,877	+				+0.1
1,992,994	-		Atu2034	0.20	-1.0
1,993,134	-		Atu2034	0.58	-0.4
1,993,144	-		Atu2034	0.60	-0.2
1,993,144	-		Atu2034	0.60	-0.1
1,993,293	+				-0.9
1,993,403	-				-0.1
1,993,458	-				-0.4
1,993,574	-		Atu2035	0.28	+0.7
1,993,617	-		Atu2035	0.35	-0.2
1,993,618	-		Atu2035	0.35	-1.0
1,993,637	-		Atu2035	0.39	+0.3
1,993,637	-		Atu2035	0.39	+0.2
1,993,637	-		Atu2035	0.39	-0.5
1,993,675	+		Atu2035	0.45	-0.7
1,993,698	-		Atu2035	0.49	+0.1
1,993,745	-		Atu2035	0.58	+0.5
1,993,761	+		Atu2035	0.60	+0.2
1,993,769	-		Atu2035	0.62	-0.1
1,993,822	-		Atu2035	0.71	-0.4
1,993,976	-				-0.6
1,994,005	+				+0.2
1,994,022	+				+0.3
1,994,050	+				+0.8
1,994,057	-				+0.1
1,994,085	+				-0.2
1,994,232	+		Atu2036	0.13	-0.4
1,994,233	+		Atu2036	0.13	+0.0
1,994,283	-		Atu2036	0.15	+0.1