Strain Fitness in Agrobacterium fabrum C58 around Atu1695

Experiment: R2A with bromate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with bromate 5 mM
1,679,172	-		Atu1693	0.89	+0.4
1,679,184	+		Atu1693	0.90	-0.2
1,679,256	+				+0.7
1,679,256	+				-1.9
1,679,256	+				+0.2
1,679,256	+				+0.6
1,679,264	-				+0.4
1,679,520	-				+0.2
1,679,520	-				+0.1
1,679,559	-				-0.0
1,679,561	+				+0.0
1,679,561	+				+0.1
1,679,569	+				-0.4
1,679,638	+				+0.6
1,679,779	+		Atu1694	0.33	+0.4
1,679,847	-		Atu1694	0.51	+0.3
1,679,916	-		Atu1694	0.70	+0.0
1,680,052	-				+0.7
1,680,054	-				-0.1
1,680,158	-				-0.1
1,680,324	+		Atu1695	0.16	+1.5
1,680,363	+		Atu1695	0.19	+1.1
1,680,363	+		Atu1695	0.19	+2.3
1,680,363	+		Atu1695	0.19	+1.1
1,680,421	-		Atu1695	0.25	+1.6
1,680,451	+		Atu1695	0.28	+1.3
1,680,453	+		Atu1695	0.28	+1.1
1,680,472	+		Atu1695	0.30	+1.1
1,680,480	-		Atu1695	0.30	+0.5
1,680,637	-		Atu1695	0.45	+0.8
1,680,643	+		Atu1695	0.46	+1.3
1,680,659	-		Atu1695	0.48	+1.6
1,680,728	+		Atu1695	0.54	+1.2
1,680,754	-		Atu1695	0.57	+1.1
1,680,761	+		Atu1695	0.57	+1.1
1,681,018	+		Atu1695	0.82	+1.2
1,681,063	+		Atu1695	0.86	+1.8
1,681,229	-				+0.5
1,681,352	-				+0.3
1,681,352	-				-0.1
1,681,475	+		Atu1696	0.10	+0.1
1,681,490	+		Atu1696	0.12	-0.1
1,681,524	-		Atu1696	0.15	+0.2
1,681,565	+		Atu1696	0.19	-0.6
1,681,566	+		Atu1696	0.20	-0.0
1,681,593	+		Atu1696	0.22	+1.0
1,681,804	+		Atu1696	0.44	+0.3
1,682,111	-		Atu1696	0.76	+0.5
1,682,112	+		Atu1696	0.76	+0.0
1,682,117	+		Atu1696	0.76	-0.2