Strain Fitness in Agrobacterium fabrum C58 around Atu1690

Experiment: R2A with bromate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with bromate 5 mM
1,673,076	-		Atu1688	0.49	-1.7
1,673,096	+		Atu1688	0.52	-1.4
1,673,101	+		Atu1688	0.52	-2.4
1,673,191	-		Atu1688	0.63	+0.5
1,673,247	+		Atu1688	0.70	+0.5
1,673,270	-		Atu1688	0.73	-0.0
1,673,411	-				-0.4
1,673,425	+				+3.0
1,673,760	-		Atu1689	0.54	+1.1
1,673,775	-		Atu1689	0.57	+1.1
1,673,899	-		Atu1689	0.82	+1.1
1,673,899	-		Atu1689	0.82	+1.1
1,674,012	-				+0.9
1,674,037	-				+1.5
1,674,126	-		Atu1690	0.11	+1.0
1,674,155	+		Atu1690	0.14	+2.4
1,674,157	+		Atu1690	0.14	+1.8
1,674,165	-		Atu1690	0.15	+1.6
1,674,247	+		Atu1690	0.21	+1.2
1,674,288	+		Atu1690	0.25	+0.9
1,674,420	+		Atu1690	0.35	+0.7
1,674,569	+		Atu1690	0.48	+1.0
1,674,634	+		Atu1690	0.53	+1.7
1,674,642	-		Atu1690	0.54	+1.0
1,674,715	+		Atu1690	0.60	+1.1
1,674,871	+		Atu1690	0.72	+1.1
1,675,058	-		Atu1690	0.88	+0.9
1,675,071	+		Atu1690	0.89	+0.9
1,675,076	+		Atu1690	0.89	+2.1
1,675,091	+				+0.9
1,675,094	-				+1.2
1,675,236	+				-0.5
1,675,393	+				+1.8
1,675,725	-				+1.5
1,675,755	+				+0.9
1,675,763	-				+0.6
1,675,804	+		Atu1691	0.11	-0.0
1,675,812	-		Atu1691	0.12	-0.2
1,675,812	-		Atu1691	0.12	+0.1
1,675,812	-		Atu1691	0.12	+0.4
1,675,822	-		Atu1691	0.13	-0.8
1,675,865	+		Atu1691	0.17	+0.5
1,675,873	+		Atu1691	0.17	+0.2
1,675,945	+		Atu1691	0.24	-0.7
1,675,979	-		Atu1691	0.27	-0.5