Strain Fitness in Agrobacterium fabrum C58 around Atu1495

Experiment: R2A with bromate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with bromate 5 mM
1,483,589	-				+0.5
1,483,648	-				+0.1
1,483,738	-		Atu1494	0.18	+0.1
1,483,811	-		Atu1494	0.27	-0.7
1,483,811	-		Atu1494	0.27	-0.1
1,483,986	+		Atu1494	0.48	+0.2
1,483,986	+		Atu1494	0.48	+0.1
1,483,987	-		Atu1494	0.48	+0.3
1,484,028	+		Atu1494	0.53	-0.9
1,484,094	-		Atu1494	0.61	+0.1
1,484,153	+		Atu1494	0.68	+0.7
1,484,175	-		Atu1494	0.71	-0.0
1,484,185	-		Atu1494	0.72	-0.2
1,484,194	-		Atu1494	0.73	-0.4
1,484,277	+		Atu1494	0.84	-0.9
1,484,287	-		Atu1494	0.85	+0.2
1,484,342	+				+0.0
1,484,385	-				-0.3
1,484,385	-				-0.1
1,484,414	+				-0.2
1,484,422	-				+0.3
1,484,422	-				-0.5
1,484,422	-				-0.1
1,484,428	-				+1.2
1,484,573	+		Atu1495	0.20	-0.2
1,484,663	-		Atu1495	0.32	-1.9
1,484,701	+		Atu1495	0.37	+0.4
1,484,746	-		Atu1495	0.42	-0.6
1,484,777	+		Atu1495	0.46	-0.6
1,485,105	+		Atu1495	0.88	+0.9
1,485,118	-		Atu1495	0.90	-0.5
1,485,120	-				-1.0