Experiment: R2A with bromate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0768 and Atu0769 are separated by 389 nucleotides Atu0769 and Atu8013 overlap by 1 nucleotides Atu8013 and Atu0770 are separated by 28 nucleotides Atu0770 and Atu0771 are separated by 61 nucleotides
Atu0768: Atu0768 - cytochrome-c oxidase chain I, at 763,517 to 765,226
Atu0768
Atu0769: Atu0769 - protoheme IX farnesyltransferase, at 765,616 to 766,569
Atu0769
Atu8013: Atu8013 - hypothetical protein, at 766,569 to 766,700
Atu8013
Atu0770: Atu0770 - cytochrome C oxidase assembly protein, at 766,729 to 767,346
Atu0770
Atu0771: Atu0771 - cytochrome c oxidase subunit III, at 767,408 to 768,283
Atu0771
Position (kb) 765
766
767 Strain fitness (log2 ratio) -2
-1
0
1 at 764.662 kb on + strand, within Atu0768 at 764.714 kb on + strand, within Atu0768 at 764.780 kb on + strand, within Atu0768 at 764.925 kb on + strand, within Atu0768 at 764.965 kb on + strand, within Atu0768 at 765.004 kb on + strand, within Atu0768 at 765.008 kb on - strand, within Atu0768 at 765.026 kb on + strand, within Atu0768 at 765.043 kb on + strand, within Atu0768 at 765.183 kb on - strand at 765.242 kb on + strand at 765.504 kb on - strand at 765.773 kb on + strand, within Atu0769 at 766.356 kb on - strand, within Atu0769 at 766.392 kb on - strand, within Atu0769 at 766.425 kb on + strand, within Atu0769 at 766.537 kb on + strand at 766.629 kb on - strand, within Atu8013 at 766.715 kb on - strand at 766.715 kb on - strand at 766.720 kb on + strand at 766.720 kb on + strand at 766.782 kb on + strand at 766.854 kb on - strand, within Atu0770 at 766.996 kb on + strand, within Atu0770 at 767.030 kb on + strand, within Atu0770 at 767.042 kb on + strand, within Atu0770 at 767.099 kb on - strand, within Atu0770 at 767.252 kb on + strand, within Atu0770 at 767.252 kb on + strand, within Atu0770 at 767.252 kb on + strand, within Atu0770 at 767.260 kb on - strand, within Atu0770 at 767.262 kb on + strand, within Atu0770 at 767.270 kb on - strand, within Atu0770 at 767.468 kb on + strand at 767.561 kb on + strand, within Atu0771
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with bromate 5 mM remove 764,662 + Atu0768 0.67 -0.9 764,714 + Atu0768 0.70 -0.5 764,780 + Atu0768 0.74 +1.5 764,925 + Atu0768 0.82 -0.5 764,965 + Atu0768 0.85 -0.4 765,004 + Atu0768 0.87 -0.2 765,008 - Atu0768 0.87 +1.2 765,026 + Atu0768 0.88 -1.6 765,043 + Atu0768 0.89 -0.4 765,183 - -1.3 765,242 + +0.5 765,504 - +0.7 765,773 + Atu0769 0.16 -0.4 766,356 - Atu0769 0.78 +1.0 766,392 - Atu0769 0.81 -2.2 766,425 + Atu0769 0.85 -0.4 766,537 + -0.7 766,629 - Atu8013 0.45 +1.0 766,715 - +0.4 766,715 - -0.2 766,720 + +0.6 766,720 + -0.3 766,782 + -0.1 766,854 - Atu0770 0.20 -0.0 766,996 + Atu0770 0.43 +0.1 767,030 + Atu0770 0.49 -0.4 767,042 + Atu0770 0.51 -0.9 767,099 - Atu0770 0.60 +0.5 767,252 + Atu0770 0.85 -0.1 767,252 + Atu0770 0.85 -0.4 767,252 + Atu0770 0.85 -0.1 767,260 - Atu0770 0.86 +0.4 767,262 + Atu0770 0.86 -0.9 767,270 - Atu0770 0.88 -0.3 767,468 + +0.2 767,561 + Atu0771 0.17 -0.2
Or see this region's nucleotide sequence