Strain Fitness in Agrobacterium fabrum C58 around Atu0698
Experiment: R2A with bromate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with bromate 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 696,763 | - | -0.7 | |||
| 696,819 | + | Atu0698 | 0.29 | -0.4 | |
| 696,827 | - | Atu0698 | 0.32 | -0.7 | |
| 696,896 | - | Atu0698 | 0.62 | -0.5 | |
| 696,896 | - | Atu0698 | 0.62 | -1.7 | |
| 696,908 | + | Atu0698 | 0.67 | -0.5 | |
| 697,022 | - | -0.5 | |||
| 697,062 | + | -0.2 | |||
| 697,099 | - | -1.3 | |||
| 697,104 | - | -0.4 | |||
| 697,104 | - | +0.2 | |||
| 697,134 | + | -0.8 | |||
| 697,220 | - | -0.2 | |||
| 697,311 | - | +0.3 | |||
| 697,425 | + | Atu0699 | 0.16 | -0.3 | |
| 697,738 | + | Atu0699 | 0.33 | -0.4 | |
| 697,785 | + | Atu0699 | 0.36 | -0.5 | |
| 697,899 | + | Atu0699 | 0.42 | +2.0 | |
| 697,907 | - | Atu0699 | 0.42 | -0.2 | |
| 697,922 | - | Atu0699 | 0.43 | +0.2 | |
| 697,970 | - | Atu0699 | 0.46 | -0.9 |
Or see this region's nucleotide sequence