Experiment: R2A with bromate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0096 and Atu0097 are separated by 265 nucleotides Atu0097 and Atu0098 overlap by 1 nucleotides Atu0098 and Atu0099 are separated by 15 nucleotides
Atu0096: Atu0096 - DNA polymerase III, tau subunit, at 99,494 to 101,368
Atu0096
Atu0097: Atu0097 - hypothetical protein, at 101,634 to 102,038
Atu0097
Atu0098: Atu0098 - mutT/nudix family protein, at 102,038 to 103,000
Atu0098
Atu0099: Atu0099 - prephenate dehydratase, at 103,016 to 103,879
Atu0099
Position (kb) 101
102
103 Strain fitness (log2 ratio) -2
-1
0
1
2 at 101.627 kb on - strand at 101.641 kb on + strand at 101.735 kb on - strand, within Atu0097 at 101.782 kb on + strand, within Atu0097 at 101.790 kb on - strand, within Atu0097 at 101.874 kb on - strand, within Atu0097 at 101.942 kb on - strand, within Atu0097 at 101.989 kb on - strand, within Atu0097 at 101.989 kb on - strand, within Atu0097 at 102.156 kb on - strand, within Atu0098 at 102.161 kb on + strand, within Atu0098 at 102.161 kb on + strand, within Atu0098 at 102.162 kb on + strand, within Atu0098 at 102.247 kb on + strand, within Atu0098 at 102.255 kb on + strand, within Atu0098 at 102.255 kb on + strand, within Atu0098 at 102.399 kb on - strand, within Atu0098 at 102.507 kb on + strand, within Atu0098 at 102.666 kb on + strand, within Atu0098 at 102.666 kb on + strand, within Atu0098 at 102.702 kb on + strand, within Atu0098 at 102.721 kb on - strand, within Atu0098 at 102.774 kb on - strand, within Atu0098 at 102.781 kb on + strand, within Atu0098 at 102.869 kb on - strand, within Atu0098 at 102.888 kb on + strand, within Atu0098 at 102.998 kb on - strand at 103.022 kb on - strand at 103.031 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with bromate 5 mM remove 101,627 - -0.1 101,641 + -0.9 101,735 - Atu0097 0.25 -0.2 101,782 + Atu0097 0.37 -1.4 101,790 - Atu0097 0.39 -0.4 101,874 - Atu0097 0.59 -0.6 101,942 - Atu0097 0.76 -0.0 101,989 - Atu0097 0.88 -2.0 101,989 - Atu0097 0.88 -0.7 102,156 - Atu0098 0.12 +2.1 102,161 + Atu0098 0.13 -0.1 102,161 + Atu0098 0.13 +0.1 102,162 + Atu0098 0.13 +0.6 102,247 + Atu0098 0.22 -1.3 102,255 + Atu0098 0.23 -0.2 102,255 + Atu0098 0.23 -0.2 102,399 - Atu0098 0.37 +0.6 102,507 + Atu0098 0.49 -0.3 102,666 + Atu0098 0.65 +0.1 102,666 + Atu0098 0.65 +0.0 102,702 + Atu0098 0.69 +0.1 102,721 - Atu0098 0.71 -0.1 102,774 - Atu0098 0.76 +0.3 102,781 + Atu0098 0.77 +0.3 102,869 - Atu0098 0.86 -0.2 102,888 + Atu0098 0.88 +0.0 102,998 - -0.7 103,022 - +1.1 103,031 - +0.6
Or see this region's nucleotide sequence