Strain Fitness in Agrobacterium fabrum C58 around Atu2397

Experiment: R2A with Manganese (II) chloride tetrahydrate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Manganese (II) chloride tetrahydrate 5 mM
2,369,228	-				-0.1
2,369,399	+		Atu2396	0.17	-0.1
2,369,409	+		Atu2396	0.18	+1.2
2,369,423	+		Atu2396	0.20	+0.2
2,369,423	+		Atu2396	0.20	-0.0
2,369,604	+		Atu2396	0.50	+0.7
2,369,713	-		Atu2396	0.68	+0.6
2,369,924	-				-0.1
2,369,961	-				+0.5
2,369,991	-				-0.1
2,370,014	+				+0.5
2,370,023	-				-0.0
2,370,237	+		Atu2397	0.11	-1.2
2,370,263	-		Atu2397	0.15	-0.3
2,370,265	-		Atu2397	0.15	+0.1
2,370,463	-		Atu2397	0.47	-0.3
2,370,520	+		Atu2397	0.56	-0.6
2,370,546	+		Atu2397	0.60	-0.2
2,370,601	+		Atu2397	0.69	+0.1
2,370,609	-		Atu2397	0.70	-0.6
2,370,614	-		Atu2397	0.71	-0.0
2,370,621	-		Atu2397	0.72	-1.0
2,370,695	+		Atu2397	0.83	-0.8
2,370,803	-				-0.0
2,370,840	+				+0.3
2,370,848	-				+0.1
2,370,906	-		Atu2398	0.11	+0.2
2,370,973	-		Atu2398	0.23	+0.5
2,370,980	+		Atu2398	0.24	-0.6
2,371,022	-		Atu2398	0.31	+0.4
2,371,069	+		Atu2398	0.39	-0.8
2,371,077	-		Atu2398	0.41	+0.1
2,371,179	+		Atu2398	0.59	-2.1
2,371,197	-		Atu2398	0.62	-0.0
2,371,300	-		Atu2398	0.80	-0.4
2,371,324	+		Atu2398	0.84	+0.1
2,371,358	-		Atu2398	0.90	+0.2
2,371,358	-		Atu2398	0.90	-1.0
2,371,485	+				+0.1
2,371,547	+				+0.3
2,371,597	-				-0.0
2,371,597	-				+0.2
2,371,688	-				-0.1