Strain Fitness in Escherichia coli BW25113 around b4265

Experiment: Outgrowth from conjugation with pRH23 in LB+Gent50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Outgrowth from conjugation with pRH23 in LB+Gent50
4,488,247	+				+0.3
4,488,301	+	idnR	b4264	0.14	-0.5
4,488,333	-	idnR	b4264	0.17	-0.4
4,488,384	+	idnR	b4264	0.22	+0.6
4,488,384	+	idnR	b4264	0.22	+0.0
4,488,394	+	idnR	b4264	0.23	-0.2
4,488,431	-	idnR	b4264	0.27	-0.5
4,488,435	-	idnR	b4264	0.27	-0.2
4,488,435	-	idnR	b4264	0.27	-1.0
4,488,437	+	idnR	b4264	0.27	-0.7
4,488,464	-	idnR	b4264	0.30	+0.3
4,488,470	+	idnR	b4264	0.31	+1.0
4,488,547	-	idnR	b4264	0.38	-0.4
4,488,552	+	idnR	b4264	0.39	-1.4
4,488,572	-	idnR	b4264	0.41	+0.0
4,488,582	-	idnR	b4264	0.42	-1.1
4,488,585	-	idnR	b4264	0.42	+0.5
4,488,596	-	idnR	b4264	0.43	-0.8
4,488,637	+	idnR	b4264	0.47	+0.0
4,488,641	+	idnR	b4264	0.48	-0.0
4,488,641	+	idnR	b4264	0.48	-0.2
4,488,641	+	idnR	b4264	0.48	-1.1
4,488,641	+	idnR	b4264	0.48	-2.1
4,488,641	+	idnR	b4264	0.48	+0.4
4,488,641	+	idnR	b4264	0.48	-0.5
4,488,642	+	idnR	b4264	0.48	+0.1
4,488,642	+	idnR	b4264	0.48	-0.5
4,488,642	+	idnR	b4264	0.48	+0.1
4,488,642	+	idnR	b4264	0.48	-0.9
4,488,642	+	idnR	b4264	0.48	-0.4
4,488,642	+	idnR	b4264	0.48	-0.3
4,488,642	+	idnR	b4264	0.48	+0.1
4,488,642	+	idnR	b4264	0.48	+1.6
4,488,653	+	idnR	b4264	0.49	-0.3
4,488,695	-	idnR	b4264	0.53	-0.2
4,488,705	-	idnR	b4264	0.54	+0.9
4,488,705	-	idnR	b4264	0.54	+1.6
4,488,707	+	idnR	b4264	0.54	+0.0
4,488,742	-	idnR	b4264	0.58	+0.1
4,488,763	+	idnR	b4264	0.60	-0.1
4,488,765	+	idnR	b4264	0.60	-0.3
4,488,765	+	idnR	b4264	0.60	+0.7
4,488,771	+	idnR	b4264	0.61	-0.5
4,488,771	+	idnR	b4264	0.61	-0.2
4,488,805	+	idnR	b4264	0.64	-0.5
4,488,820	+	idnR	b4264	0.66	+0.0
4,488,820	+	idnR	b4264	0.66	+0.1
4,488,820	+	idnR	b4264	0.66	-0.1
4,488,821	+	idnR	b4264	0.66	-1.2
4,488,821	+	idnR	b4264	0.66	-0.2
4,488,823	-	idnR	b4264	0.66	-1.7
4,488,870	+	idnR	b4264	0.71	-0.3
4,488,967	+	idnR	b4264	0.80	-0.8
4,488,967	+	idnR	b4264	0.80	+0.5
4,488,977	-	idnR	b4264	0.81	-1.2
4,488,981	+	idnR	b4264	0.82	+0.8
4,489,005	+	idnR	b4264	0.84	-1.6
4,489,017	+	idnR	b4264	0.85	-0.2
4,489,054	-	idnR	b4264	0.89	+1.9
4,489,092	-				+0.1
4,489,097	-				+0.2
4,489,118	+				+0.1
4,489,118	+				-0.4
4,489,121	-				-0.2
4,489,121	-				-0.1
4,489,123	+				-0.6
4,489,123	+				-0.5
4,489,126	-				-0.3
4,489,131	-				-0.3
4,489,133	+				-1.0
4,489,133	+				-0.4
4,489,193	-				+0.0
4,489,217	-				+0.4
4,489,250	-				-0.8
4,489,306	+				-0.3
4,489,306	+				-0.9
4,489,324	-				+0.1
4,489,338	-				+0.1
4,489,341	+				-0.7
4,489,341	+				+1.3
4,489,357	+				-0.7
4,489,408	+	idnT	b4265	0.14	-1.2
4,489,408	+	idnT	b4265	0.14	-0.2
4,489,427	+	idnT	b4265	0.15	+0.7
4,489,427	+	idnT	b4265	0.15	-0.4
4,489,477	-	idnT	b4265	0.19	-0.3
4,489,514	+	idnT	b4265	0.22	+0.0
4,489,522	+	idnT	b4265	0.22	-0.4
4,489,524	+	idnT	b4265	0.22	-0.8
4,489,524	+	idnT	b4265	0.22	+0.4
4,489,532	-	idnT	b4265	0.23	+0.4
4,489,537	-	idnT	b4265	0.23	+0.2
4,489,540	-	idnT	b4265	0.24	-0.6
4,489,540	-	idnT	b4265	0.24	-0.4
4,489,540	-	idnT	b4265	0.24	+0.2
4,489,549	+				-0.1
4,489,595	+	idnT	b4265	0.28	-0.8
4,489,607	-	idnT	b4265	0.29	+0.6
4,489,609	+	idnT	b4265	0.29	-1.5
4,489,609	+	idnT	b4265	0.29	-0.4
4,489,659	+	idnT	b4265	0.33	+0.4
4,489,665	-	idnT	b4265	0.33	-0.6
4,489,695	+	idnT	b4265	0.35	+0.1
4,489,695	+	idnT	b4265	0.35	+0.5
4,489,698	-	idnT	b4265	0.36	+0.2
4,489,698	-	idnT	b4265	0.36	-0.1
4,489,707	+	idnT	b4265	0.36	-0.5
4,489,712	-	idnT	b4265	0.37	+0.1
4,489,713	-	idnT	b4265	0.37	-0.2
4,489,713	-	idnT	b4265	0.37	-0.2
4,489,718	-	idnT	b4265	0.37	+0.1
4,489,841	+	idnT	b4265	0.46	-0.1
4,489,842	+	idnT	b4265	0.46	-0.4
4,489,963	+	idnT	b4265	0.56	-0.3
4,489,986	-	idnT	b4265	0.57	+0.7
4,490,094	-	idnT	b4265	0.66	-0.4
4,490,110	+	idnT	b4265	0.67	-0.6
4,490,113	+	idnT	b4265	0.67	-0.6
4,490,123	-	idnT	b4265	0.68	+0.2
4,490,130	+	idnT	b4265	0.68	+0.6
4,490,144	+	idnT	b4265	0.69	-0.2
4,490,144	+	idnT	b4265	0.69	-0.4
4,490,144	+	idnT	b4265	0.69	-0.1
4,490,144	+	idnT	b4265	0.69	-0.9
4,490,144	+	idnT	b4265	0.69	-0.5
4,490,149	+	idnT	b4265	0.70	-0.3
4,490,191	+	idnT	b4265	0.73	+0.0
4,490,246	-	idnT	b4265	0.77	+0.2
4,490,253	-	idnT	b4265	0.78	-0.5
4,490,295	+	idnT	b4265	0.81	+0.3
4,490,302	+	idnT	b4265	0.81	+0.3
4,490,302	+	idnT	b4265	0.81	+0.1
4,490,333	+	idnT	b4265	0.84	-0.2
4,490,341	-	idnT	b4265	0.84	-0.7
4,490,346	-	idnT	b4265	0.85	-0.0
4,490,395	+	idnT	b4265	0.88	-0.5
4,490,395	+	idnT	b4265	0.88	-0.0
4,490,411	-	idnT	b4265	0.90	+0.1
4,490,411	-	idnT	b4265	0.90	+0.5
4,490,426	+				-1.0
4,490,426	+				+0.2
4,490,430	-				-0.0
4,490,430	-				+0.0
4,490,550	+				-0.3
4,490,550	+				+0.2
4,490,594	+				-0.2
4,490,594	+				+0.1
4,490,596	+				-0.1
4,490,596	+				-0.4
4,490,627	-				-0.4
4,490,690	+	idnO	b4266	0.10	+0.0
4,490,722	-	idnO	b4266	0.15	+0.1
4,490,726	-	idnO	b4266	0.15	+0.1
4,490,758	-	idnO	b4266	0.19	+0.1
4,490,758	-	idnO	b4266	0.19	+0.0
4,490,777	-	idnO	b4266	0.22	-0.3
4,490,777	-	idnO	b4266	0.22	+0.0
4,490,813	+	idnO	b4266	0.27	-0.3
4,490,857	-	idnO	b4266	0.32	+0.1
4,490,905	+	idnO	b4266	0.39	-0.2
4,490,905	+	idnO	b4266	0.39	-1.6
4,490,916	+	idnO	b4266	0.40	-0.1
4,490,949	-	idnO	b4266	0.44	-0.1
4,490,949	-	idnO	b4266	0.44	-1.0
4,490,973	-	idnO	b4266	0.47	+0.1
4,490,978	-	idnO	b4266	0.48	-0.1
4,490,987	+	idnO	b4266	0.49	-0.1
4,490,989	-	idnO	b4266	0.50	-0.8
4,491,007	-	idnO	b4266	0.52	-1.0
4,491,021	+	idnO	b4266	0.54	+0.2
4,491,021	+	idnO	b4266	0.54	-1.1
4,491,026	+	idnO	b4266	0.54	-1.0
4,491,065	+	idnO	b4266	0.59	-0.5
4,491,067	+	idnO	b4266	0.60	-1.1
4,491,067	+	idnO	b4266	0.60	-1.1
4,491,080	-	idnO	b4266	0.61	-1.2
4,491,083	+	idnO	b4266	0.62	-1.6
4,491,083	+	idnO	b4266	0.62	-0.8
4,491,083	+	idnO	b4266	0.62	-0.2
4,491,086	+	idnO	b4266	0.62	-0.7
4,491,107	-	idnO	b4266	0.65	+0.8
4,491,109	+	idnO	b4266	0.65	+0.4
4,491,176	+	idnO	b4266	0.74	-0.2
4,491,197	+	idnO	b4266	0.77	+1.4
4,491,197	+	idnO	b4266	0.77	-0.6
4,491,200	+	idnO	b4266	0.77	+0.3
4,491,232	+	idnO	b4266	0.81	-1.7
4,491,232	+	idnO	b4266	0.81	+2.2
4,491,279	+	idnO	b4266	0.87	-0.6
4,491,315	+				-0.4
4,491,320	+				+1.6
4,491,320	+				+0.2
4,491,320	+				+1.8
4,491,320	+				+0.8
4,491,320	+				-1.4
4,491,328	-				-1.2
4,491,416	-				-0.6
4,491,416	-				+0.1
4,491,464	-				-1.0
4,491,465	-				+0.4
4,491,466	-				-0.1
4,491,476	-				-0.6
4,491,476	-				-0.5
4,491,486	-				-0.7
4,491,497	-				-0.2
4,491,509	-	idnD	b4267	0.11	+0.1
4,491,530	-				-1.6
4,491,530	-	idnD	b4267	0.13	+1.0
4,491,530	-	idnD	b4267	0.13	+0.0
4,491,537	-	idnD	b4267	0.13	-0.4
4,491,537	-	idnD	b4267	0.13	-0.4