Experiment: GFP_control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybiN and ybiO overlap by 4 nucleotides ybiO and glnQ are separated by 260 nucleotides glnQ and glnP overlap by 4 nucleotides
b0807: ybiN - orf, hypothetical protein (VIMSS), at 841,555 to 842,481
ybiN
b0808: ybiO - putative transport protein (VIMSS), at 842,478 to 844,703
ybiO
b0809: glnQ - glutamine ABC transporter ATP-binding protein (NCBI), at 844,964 to 845,686
glnQ
b0810: glnP - glutamine ABC transporter permease protein (NCBI), at 845,683 to 846,342
glnP
Position (kb) 842
843
844
845 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 841.546 kb on - strand at 841.559 kb on - strand at 841.559 kb on - strand at 841.559 kb on - strand at 841.658 kb on + strand, within ybiN at 841.678 kb on - strand, within ybiN at 841.682 kb on + strand, within ybiN at 841.689 kb on - strand, within ybiN at 841.769 kb on - strand, within ybiN at 841.792 kb on + strand, within ybiN at 841.976 kb on + strand, within ybiN at 841.979 kb on - strand, within ybiN at 841.986 kb on + strand, within ybiN at 842.073 kb on - strand, within ybiN at 842.220 kb on - strand, within ybiN at 842.461 kb on + strand at 842.519 kb on - strand at 842.601 kb on - strand at 842.671 kb on + strand at 842.941 kb on - strand, within ybiO at 842.962 kb on - strand, within ybiO at 843.218 kb on - strand, within ybiO at 843.370 kb on - strand, within ybiO at 843.660 kb on + strand, within ybiO at 843.784 kb on + strand, within ybiO at 843.784 kb on + strand, within ybiO at 843.784 kb on + strand, within ybiO at 843.792 kb on - strand, within ybiO at 843.792 kb on - strand, within ybiO at 843.792 kb on - strand, within ybiO at 843.792 kb on - strand, within ybiO at 843.794 kb on + strand, within ybiO at 843.802 kb on - strand, within ybiO at 843.888 kb on - strand, within ybiO at 843.930 kb on + strand, within ybiO at 843.930 kb on + strand, within ybiO at 843.937 kb on + strand, within ybiO at 843.937 kb on + strand, within ybiO at 843.938 kb on - strand, within ybiO at 843.938 kb on - strand, within ybiO at 844.010 kb on + strand, within ybiO at 844.067 kb on - strand, within ybiO at 844.067 kb on - strand, within ybiO at 844.260 kb on + strand, within ybiO at 844.260 kb on + strand, within ybiO at 844.260 kb on + strand, within ybiO at 844.392 kb on - strand, within ybiO at 844.460 kb on - strand, within ybiO at 844.460 kb on - strand, within ybiO at 844.694 kb on - strand at 844.712 kb on - strand at 845.109 kb on + strand, within glnQ at 845.154 kb on + strand, within glnQ at 845.243 kb on + strand, within glnQ at 845.243 kb on + strand, within glnQ at 845.288 kb on + strand, within glnQ at 845.547 kb on - strand, within glnQ at 845.569 kb on + strand, within glnQ at 845.596 kb on - strand, within glnQ at 845.596 kb on - strand, within glnQ
Per-strain Table
Position Strand Gene LocusTag Fraction GFP_control remove 841,546 - -0.4 841,559 - -0.2 841,559 - +1.3 841,559 - -0.0 841,658 + ybiN b0807 0.11 +0.2 841,678 - ybiN b0807 0.13 +0.2 841,682 + ybiN b0807 0.14 -2.1 841,689 - ybiN b0807 0.14 -1.3 841,769 - ybiN b0807 0.23 -0.0 841,792 + ybiN b0807 0.26 -0.4 841,976 + ybiN b0807 0.45 +0.2 841,979 - ybiN b0807 0.46 -1.2 841,986 + ybiN b0807 0.46 +0.4 842,073 - ybiN b0807 0.56 -1.3 842,220 - ybiN b0807 0.72 -0.5 842,461 + +0.6 842,519 - +0.1 842,601 - -3.2 842,671 + -1.4 842,941 - ybiO b0808 0.21 -0.4 842,962 - ybiO b0808 0.22 -1.4 843,218 - ybiO b0808 0.33 +0.5 843,370 - ybiO b0808 0.40 -0.0 843,660 + ybiO b0808 0.53 -0.1 843,784 + ybiO b0808 0.59 -2.2 843,784 + ybiO b0808 0.59 +0.2 843,784 + ybiO b0808 0.59 +0.5 843,792 - ybiO b0808 0.59 +0.3 843,792 - ybiO b0808 0.59 +1.1 843,792 - ybiO b0808 0.59 -2.2 843,792 - ybiO b0808 0.59 -0.7 843,794 + ybiO b0808 0.59 -0.6 843,802 - ybiO b0808 0.59 +0.9 843,888 - ybiO b0808 0.63 +1.3 843,930 + ybiO b0808 0.65 +0.7 843,930 + ybiO b0808 0.65 +0.5 843,937 + ybiO b0808 0.66 -0.7 843,937 + ybiO b0808 0.66 -0.6 843,938 - ybiO b0808 0.66 -0.5 843,938 - ybiO b0808 0.66 +0.6 844,010 + ybiO b0808 0.69 -0.7 844,067 - ybiO b0808 0.71 -1.3 844,067 - ybiO b0808 0.71 -2.4 844,260 + ybiO b0808 0.80 -0.8 844,260 + ybiO b0808 0.80 -0.8 844,260 + ybiO b0808 0.80 -0.8 844,392 - ybiO b0808 0.86 +0.5 844,460 - ybiO b0808 0.89 -1.6 844,460 - ybiO b0808 0.89 -0.1 844,694 - -0.1 844,712 - +0.0 845,109 + glnQ b0809 0.20 -0.6 845,154 + glnQ b0809 0.26 +0.9 845,243 + glnQ b0809 0.39 +0.2 845,243 + glnQ b0809 0.39 +1.0 845,288 + glnQ b0809 0.45 +0.6 845,547 - glnQ b0809 0.81 -0.6 845,569 + glnQ b0809 0.84 -0.9 845,596 - glnQ b0809 0.87 +0.6 845,596 - glnQ b0809 0.87 +0.1
Or see this region's nucleotide sequence