Strain Fitness in Escherichia coli BW25113 around b3719

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
3,896,452	+	cbrC	b3717	0.69	+0.2
3,896,452	+	cbrC	b3717	0.69	-0.9
3,896,473	-	cbrC	b3717	0.73	+0.4
3,896,494	+	cbrC	b3717	0.76	-0.5
3,896,570	-	cbrC	b3717	0.89	+0.4
3,896,570	-	cbrC	b3717	0.89	-0.4
3,896,579	+				+0.2
3,896,579	+				-0.2
3,896,587	-				-2.4
3,896,587	-				-0.4
3,896,588	+				+0.6
3,896,589	+				-0.2
3,896,589	+				+0.1
3,896,589	+				+0.7
3,896,589	+				+1.1
3,896,589	+				+0.7
3,896,589	+				-0.0
3,896,589	+				+0.1
3,896,589	+				-0.4
3,896,589	+				-0.2
3,896,589	+				-0.1
3,896,591	+				+0.2
3,896,597	-				-0.2
3,896,604	+				-0.2
3,896,604	+				-0.0
3,896,604	+				-0.1
3,896,604	+				-0.9
3,896,605	+				+0.5
3,896,605	+				-0.3
3,896,624	+				-0.4
3,896,624	+				+0.6
3,896,699	-				+0.4
3,896,752	-				+0.1
3,896,757	-				-0.4
3,896,757	-				-0.2
3,896,781	-	yieK	b3718	0.12	-1.3
3,896,786	-	yieK	b3718	0.13	-0.6
3,896,896	-	yieK	b3718	0.28	+0.7
3,896,896	-	yieK	b3718	0.28	+0.2
3,896,898	+	yieK	b3718	0.28	-0.8
3,896,906	-	yieK	b3718	0.29	+0.1
3,896,939	+	yieK	b3718	0.34	+0.7
3,896,967	-	yieK	b3718	0.38	+0.3
3,897,021	+	yieK	b3718	0.45	+0.5
3,897,092	-	yieK	b3718	0.55	+0.7
3,897,110	-	yieK	b3718	0.58	-1.4
3,897,174	+	yieK	b3718	0.66	-0.5
3,897,193	+	yieK	b3718	0.69	+0.5
3,897,247	+	yieK	b3718	0.76	+0.3
3,897,279	-	yieK	b3718	0.81	+1.2
3,897,279	-	yieK	b3718	0.81	-0.5
3,897,331	-	yieK	b3718	0.88	+0.7
3,897,345	-				+0.4
3,897,466	-				-0.3
3,897,467	-				+0.1
3,897,467	-				-0.2
3,897,499	-				-0.0
3,897,566	-	yieL	b3719	0.12	-0.8
3,897,591	+	yieL	b3719	0.14	-0.2
3,897,598	-	yieL	b3719	0.14	+0.3
3,897,623	+	yieL	b3719	0.16	+0.7
3,897,660	+	yieL	b3719	0.20	-0.9
3,897,660	+	yieL	b3719	0.20	-0.2
3,897,667	-	yieL	b3719	0.20	+0.3
3,897,668	+	yieL	b3719	0.20	+0.8
3,897,803	-	yieL	b3719	0.32	-0.5
3,898,019	+	yieL	b3719	0.50	-0.2
3,898,019	+	yieL	b3719	0.50	+0.3
3,898,026	-	yieL	b3719	0.51	-0.2
3,898,046	+	yieL	b3719	0.53	-1.1
3,898,082	+	yieL	b3719	0.56	+0.2
3,898,121	-	yieL	b3719	0.59	-0.1
3,898,124	+	yieL	b3719	0.59	-0.2
3,898,278	+	yieL	b3719	0.72	-0.4
3,898,290	-	yieL	b3719	0.73	+0.2
3,898,328	+	yieL	b3719	0.77	-0.2
3,898,328	+	yieL	b3719	0.77	+0.5
3,898,330	+	yieL	b3719	0.77	+0.2
3,898,330	+	yieL	b3719	0.77	+0.6
3,898,333	-	yieL	b3719	0.77	-0.1
3,898,333	-	yieL	b3719	0.77	-0.1
3,898,335	+	yieL	b3719	0.77	-0.2
3,898,335	+	yieL	b3719	0.77	+1.3
3,898,335	+	yieL	b3719	0.77	+0.8
3,898,341	+	yieL	b3719	0.78	+0.3
3,898,341	+	yieL	b3719	0.78	+0.4
3,898,406	+	yieL	b3719	0.83	+0.2
3,898,408	+	yieL	b3719	0.84	+0.2
3,898,411	+	yieL	b3719	0.84	+0.5
3,898,414	+	yieL	b3719	0.84	+0.0
3,898,414	+	yieL	b3719	0.84	+0.3
3,898,445	+	yieL	b3719	0.87	+0.7
3,898,458	+	yieL	b3719	0.88	-0.3
3,898,458	-	yieL	b3719	0.88	-0.2
3,898,460	+	yieL	b3719	0.88	+0.2
3,898,467	+	yieL	b3719	0.89	-0.4
3,898,467	+	yieL	b3719	0.89	-0.4
3,898,467	+	yieL	b3719	0.89	+0.6
3,898,470	-	yieL	b3719	0.89	+0.2
3,898,474	+	yieL	b3719	0.89	-0.3
3,898,474	+	yieL	b3719	0.89	-0.4
3,898,475	-	yieL	b3719	0.89	+0.4
3,898,479	+	yieL	b3719	0.90	-0.2
3,898,480	-	yieL	b3719	0.90	-0.2
3,898,480	-	yieL	b3719	0.90	-0.3
3,898,487	+				-0.4
3,898,487	+				+0.3
3,898,487	-				+0.4
3,898,487	-				+0.3
3,898,487	-				+0.1
3,898,487	-				-0.2
3,898,487	-				-0.9
3,898,498	+				+0.5
3,898,503	+				+0.3
3,898,503	+				-0.1
3,898,503	-				+0.1
3,898,511	-				-0.3
3,898,511	-				+0.3
3,898,521	+				-0.7
3,898,521	+				+0.4
3,898,521	+				+0.6
3,898,529	-				+0.3
3,898,533	+				-0.2
3,898,533	+				+0.4
3,898,533	+				+0.3
3,898,534	+				+0.7
3,898,548	+				+0.2
3,898,548	+				-0.8
3,898,551	+				+0.1
3,898,551	+				-0.0
3,898,551	+				+0.1
3,898,573	+				+0.1
3,898,606	-				+1.2
3,898,621	+				-0.0
3,898,636	+				-0.5
3,898,637	+				-0.1
3,898,637	+				+0.0
3,898,637	+				-0.4
3,898,637	+				-0.3
3,898,637	+				+0.4
3,898,638	-				+0.0
3,898,645	-				-1.5
3,898,645	-				+1.0
3,898,655	+				+0.3
3,898,655	+				-0.6
3,898,660	+				-0.0
3,898,665	+				-0.3
3,898,670	+				+0.2
3,898,678	-				-0.2
3,898,680	+				+0.4
3,898,691	+				+0.4
3,898,691	+				+0.3
3,898,699	-				+1.7
3,898,708	+				+0.4
3,898,708	+				+0.4
3,898,716	+				+0.0
3,898,716	-				+0.3
3,898,716	-				-0.3
3,898,718	+				-0.0
3,898,718	+				+0.5
3,898,718	+				+0.3
3,898,720	+				+0.3
3,898,720	+				-0.0
3,898,720	+				-0.6
3,898,720	+				-0.3
3,898,725	+				-0.6
3,898,756	+				-0.1
3,898,757	+				-0.0
3,898,760	+				-0.3
3,898,760	+				+0.1
3,898,761	+				+3.9
3,898,764	+				-0.1
3,898,764	+				-0.3
3,898,764	+				+0.5
3,898,768	+				-0.4
3,898,768	+				+0.7
3,898,769	+				-0.2
3,898,769	+				+0.0
3,898,772	-				+2.9
3,898,792	-	bglH	b3720	0.10	-0.2
3,898,792	-	bglH	b3720	0.10	+0.6
3,898,792	-	bglH	b3720	0.10	+0.2
3,898,792	-	bglH	b3720	0.10	+0.5
3,898,792	-	bglH	b3720	0.10	-0.3
3,898,801	+	bglH	b3720	0.11	+0.3
3,898,801	+	bglH	b3720	0.11	-0.2
3,898,843	+	bglH	b3720	0.13	+0.0
3,898,851	+	bglH	b3720	0.14	+1.0
3,898,864	-	bglH	b3720	0.15	+0.3
3,898,864	-	bglH	b3720	0.15	+1.0
3,898,866	+	bglH	b3720	0.15	+0.1
3,898,866	+	bglH	b3720	0.15	+0.4
3,898,866	+	bglH	b3720	0.15	+0.5
3,898,866	+	bglH	b3720	0.15	+1.6
3,898,866	+	bglH	b3720	0.15	+0.0
3,898,866	+	bglH	b3720	0.15	-0.0
3,898,866	+	bglH	b3720	0.15	+0.8
3,898,866	+	bglH	b3720	0.15	+0.3
3,898,866	+	bglH	b3720	0.15	+0.2
3,898,866	+	bglH	b3720	0.15	+0.0
3,898,866	+	bglH	b3720	0.15	+0.1
3,898,866	+	bglH	b3720	0.15	-0.2
3,898,866	+	bglH	b3720	0.15	+0.2
3,898,866	+	bglH	b3720	0.15	-0.5
3,898,866	+	bglH	b3720	0.15	+0.1
3,898,874	+	bglH	b3720	0.15	+0.5
3,898,874	-	bglH	b3720	0.15	-0.7
3,898,874	-	bglH	b3720	0.15	-1.7
3,898,874	-	bglH	b3720	0.15	+0.5
3,898,874	-	bglH	b3720	0.15	+0.7
3,898,874	-	bglH	b3720	0.15	+1.1
3,898,874	-	bglH	b3720	0.15	-1.0
3,898,874	-	bglH	b3720	0.15	+0.6
3,898,874	-	bglH	b3720	0.15	+0.1
3,898,874	-	bglH	b3720	0.15	+0.4
3,898,875	-	bglH	b3720	0.15	+0.2
3,898,884	-	bglH	b3720	0.16	-0.3
3,898,897	+	bglH	b3720	0.17	-0.6
3,898,897	+	bglH	b3720	0.17	+0.2
3,898,905	-	bglH	b3720	0.17	-1.2
3,898,905	-	bglH	b3720	0.17	-0.4
3,898,909	+	bglH	b3720	0.17	+0.5
3,898,909	+	bglH	b3720	0.17	+1.0
3,898,909	+	bglH	b3720	0.17	+1.5
3,898,917	-	bglH	b3720	0.18	+0.1
3,898,942	-	bglH	b3720	0.19	-0.2
3,898,963	+	bglH	b3720	0.21	-1.8
3,898,966	-	bglH	b3720	0.21	-0.2
3,898,966	-	bglH	b3720	0.21	+0.2
3,898,968	-	bglH	b3720	0.21	-0.7
3,898,972	-	bglH	b3720	0.21	-0.2
3,898,972	-	bglH	b3720	0.21	+0.2
3,898,990	-	bglH	b3720	0.22	-0.2
3,898,990	-	bglH	b3720	0.22	+0.1
3,899,007	-	bglH	b3720	0.24	-0.6
3,899,021	+	bglH	b3720	0.24	-0.3
3,899,021	+	bglH	b3720	0.24	-0.7
3,899,029	-	bglH	b3720	0.25	+0.5
3,899,029	-	bglH	b3720	0.25	+0.3
3,899,029	-	bglH	b3720	0.25	+0.2
3,899,029	-	bglH	b3720	0.25	+0.1
3,899,029	-	bglH	b3720	0.25	-0.1
3,899,030	-	bglH	b3720	0.25	-0.8
3,899,030	-	bglH	b3720	0.25	+1.3
3,899,043	-	bglH	b3720	0.26	+1.1
3,899,043	-	bglH	b3720	0.26	+1.2
3,899,046	+	bglH	b3720	0.26	+0.2
3,899,046	+	bglH	b3720	0.26	+0.7
3,899,047	+	bglH	b3720	0.26	+1.0
3,899,049	-	bglH	b3720	0.26	-0.1
3,899,050	+	bglH	b3720	0.26	-0.5
3,899,054	-	bglH	b3720	0.26	-1.4
3,899,055	+	bglH	b3720	0.26	+0.5
3,899,055	-	bglH	b3720	0.26	-0.1
3,899,055	-	bglH	b3720	0.26	-0.3
3,899,060	-	bglH	b3720	0.27	+0.8
3,899,060	-	bglH	b3720	0.27	-0.2
3,899,063	-	bglH	b3720	0.27	+0.5
3,899,068	+	bglH	b3720	0.27	+0.3
3,899,068	-	bglH	b3720	0.27	-0.3
3,899,068	-	bglH	b3720	0.27	-0.3
3,899,084	+	bglH	b3720	0.28	-0.3
3,899,095	-	bglH	b3720	0.29	+1.1
3,899,095	-	bglH	b3720	0.29	-0.2
3,899,108	-	bglH	b3720	0.30	-1.1
3,899,138	-	bglH	b3720	0.32	+0.2
3,899,217	+	bglH	b3720	0.36	+0.3
3,899,236	+	bglH	b3720	0.38	+1.8
3,899,248	-	bglH	b3720	0.38	+1.5
3,899,248	-	bglH	b3720	0.38	+2.2
3,899,281	+	bglH	b3720	0.40	-0.7
3,899,289	-	bglH	b3720	0.41	+0.4
3,899,295	-	bglH	b3720	0.41	+0.1
3,899,295	-	bglH	b3720	0.41	-0.3
3,899,303	-	bglH	b3720	0.42	-0.1
3,899,303	-	bglH	b3720	0.42	-0.1
3,899,303	-	bglH	b3720	0.42	+0.5
3,899,303	-	bglH	b3720	0.42	+0.2
3,899,303	-	bglH	b3720	0.42	-0.3
3,899,309	+	bglH	b3720	0.42	+1.8
3,899,309	+	bglH	b3720	0.42	+1.3
3,899,311	-	bglH	b3720	0.42	+0.4
3,899,311	-	bglH	b3720	0.42	+0.2
3,899,311	-	bglH	b3720	0.42	+0.6
3,899,313	-	bglH	b3720	0.42	+1.3
3,899,314	-	bglH	b3720	0.42	+0.4
3,899,314	-	bglH	b3720	0.42	+0.3
3,899,314	-	bglH	b3720	0.42	-0.8
3,899,314	-	bglH	b3720	0.42	+0.6
3,899,314	-	bglH	b3720	0.42	+0.2
3,899,314	-	bglH	b3720	0.42	-0.6
3,899,314	-	bglH	b3720	0.42	-0.0
3,899,314	-	bglH	b3720	0.42	+0.0
3,899,314	-	bglH	b3720	0.42	+0.5
3,899,314	-	bglH	b3720	0.42	-0.4
3,899,318	-	bglH	b3720	0.43	-0.2
3,899,318	-	bglH	b3720	0.43	+0.0
3,899,325	-	bglH	b3720	0.43	-0.0
3,899,328	+	bglH	b3720	0.43	+0.0
3,899,329	-	bglH	b3720	0.43	+0.2
3,899,329	-	bglH	b3720	0.43	-0.2
3,899,329	-	bglH	b3720	0.43	-0.0
3,899,337	-	bglH	b3720	0.44	-0.2
3,899,337	-	bglH	b3720	0.44	+0.4
3,899,337	-	bglH	b3720	0.44	-0.3
3,899,348	-	bglH	b3720	0.45	-0.3
3,899,358	-	bglH	b3720	0.45	+0.0
3,899,358	-	bglH	b3720	0.45	-0.2
3,899,358	-	bglH	b3720	0.45	-0.1
3,899,363	+	bglH	b3720	0.46	+1.3
3,899,371	-	bglH	b3720	0.46	-1.5
3,899,402	-	bglH	b3720	0.48	-0.1
3,899,402	-	bglH	b3720	0.48	+0.4
3,899,402	-	bglH	b3720	0.48	+0.3
3,899,402	-	bglH	b3720	0.48	-0.4
3,899,406	-	bglH	b3720	0.48	+0.1
3,899,409	-	bglH	b3720	0.48	+0.0
3,899,409	-	bglH	b3720	0.48	+0.2
3,899,413	-	bglH	b3720	0.49	-0.4
3,899,415	-	bglH	b3720	0.49	-0.4
3,899,415	-	bglH	b3720	0.49	-0.4
3,899,415	-	bglH	b3720	0.49	-0.1
3,899,419	+	bglH	b3720	0.49	+1.8
3,899,419	+	bglH	b3720	0.49	+1.8
3,899,449	-	bglH	b3720	0.51	+0.0
3,899,449	-	bglH	b3720	0.51	-0.3
3,899,466	+	bglH	b3720	0.52	+1.1
3,899,467	+	bglH	b3720	0.52	+0.8
3,899,467	+	bglH	b3720	0.52	+0.4
3,899,480	-	bglH	b3720	0.53	+0.7
3,899,480	-	bglH	b3720	0.53	-3.3
3,899,481	-	bglH	b3720	0.53	-0.0
3,899,481	-	bglH	b3720	0.53	-1.1
3,899,481	-	bglH	b3720	0.53	+0.1
3,899,482	-	bglH	b3720	0.53	-0.0
3,899,482	-	bglH	b3720	0.53	+0.7
3,899,482	-	bglH	b3720	0.53	+0.6
3,899,482	-	bglH	b3720	0.53	+0.4
3,899,482	-	bglH	b3720	0.53	+0.1
3,899,482	-	bglH	b3720	0.53	-0.5
3,899,482	-	bglH	b3720	0.53	+0.5
3,899,485	-	bglH	b3720	0.53	+0.1
3,899,489	+	bglH	b3720	0.53	+1.0
3,899,490	+	bglH	b3720	0.53	+0.4
3,899,490	+	bglH	b3720	0.53	-0.7
3,899,492	-	bglH	b3720	0.53	+0.1
3,899,492	-	bglH	b3720	0.53	-0.2
3,899,492	-	bglH	b3720	0.53	+1.3
3,899,492	-	bglH	b3720	0.53	+0.5
3,899,492	-	bglH	b3720	0.53	+0.3
3,899,496	-	bglH	b3720	0.54	+0.1
3,899,497	+	bglH	b3720	0.54	+0.7
3,899,500	-	bglH	b3720	0.54	+0.3
3,899,500	-	bglH	b3720	0.54	-0.4
3,899,500	-	bglH	b3720	0.54	-0.0
3,899,552	-	bglH	b3720	0.57	+0.1
3,899,563	-	bglH	b3720	0.58	+0.3
3,899,569	-	bglH	b3720	0.58	-0.3
3,899,593	+	bglH	b3720	0.60	-0.3
3,899,593	+	bglH	b3720	0.60	+0.1
3,899,596	+	bglH	b3720	0.60	+0.2