Strain Fitness in Escherichia coli BW25113 around b3651

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
3,821,855	+	spoT	b3650	0.68	-3.6
3,821,855	+	spoT	b3650	0.68	-3.9
3,821,879	+	spoT	b3650	0.69	-4.6
3,821,920	-	spoT	b3650	0.71	-2.5
3,821,939	+	spoT	b3650	0.72	-3.5
3,821,957	-	spoT	b3650	0.73	-2.4
3,821,957	-	spoT	b3650	0.73	-1.5
3,821,972	-	spoT	b3650	0.73	-3.2
3,822,086	+	spoT	b3650	0.79	-3.3
3,822,104	-	spoT	b3650	0.80	-5.1
3,822,116	-	spoT	b3650	0.80	-3.8
3,822,174	-	spoT	b3650	0.83	-1.0
3,822,214	-	spoT	b3650	0.85	-1.9
3,822,220	+	spoT	b3650	0.85	-2.7
3,822,220	+	spoT	b3650	0.85	-2.6
3,822,222	+	spoT	b3650	0.85	-4.7
3,822,244	+	spoT	b3650	0.86	-0.8
3,822,263	-	spoT	b3650	0.87	-0.8
3,822,263	-	spoT	b3650	0.87	-3.5
3,822,397	-				-2.6
3,822,397	-				-1.0
3,822,401	-				-1.7
3,822,409	-				-1.4
3,822,409	-				-2.1
3,822,417	+				-2.7
3,822,455	+				-3.1
3,822,455	+				-2.4
3,822,493	+				-0.3
3,822,493	+				-0.9
3,822,592	+				+0.2
3,822,615	+	trmH	b3651	0.11	-0.5
3,822,615	+	trmH	b3651	0.11	-0.2
3,822,615	+	trmH	b3651	0.11	+0.1
3,822,618	-	trmH	b3651	0.12	+0.0
3,822,635	-	trmH	b3651	0.14	-0.2
3,822,733	+	trmH	b3651	0.28	+0.2
3,822,746	+	trmH	b3651	0.30	-0.4
3,822,746	+	trmH	b3651	0.30	+0.1
3,822,749	-	trmH	b3651	0.31	+0.6
3,822,761	-	trmH	b3651	0.32	-0.8
3,822,778	-	trmH	b3651	0.35	-0.3
3,822,796	-	trmH	b3651	0.37	+0.3
3,822,799	+	trmH	b3651	0.38	-0.7
3,822,799	+	trmH	b3651	0.38	+0.9
3,822,807	-	trmH	b3651	0.39	-0.1
3,822,922	-	trmH	b3651	0.56	-0.1
3,822,930	-	trmH	b3651	0.57	-0.6
3,822,930	-	trmH	b3651	0.57	+0.9
3,822,945	-	trmH	b3651	0.59	-0.1
3,823,040	-	trmH	b3651	0.73	+0.4
3,823,089	-	trmH	b3651	0.80	-0.0
3,823,117	-	trmH	b3651	0.84	+0.4
3,823,179	+				+1.4
3,823,179	+				-1.4
3,823,189	+				-0.6
3,823,189	+				-0.9
3,823,215	-				+0.4
3,823,215	-				-0.3
3,823,231	-				+0.6
3,823,265	+				-0.2
3,823,267	+				-0.3
3,823,285	+				-0.3
3,823,341	+				-1.3
3,823,341	+				-1.0
3,823,379	+				-1.6
3,823,379	+				-1.4
3,823,387	-				-0.9
3,823,387	-				-0.3
3,823,393	+				-0.2
3,823,439	+				-1.0
3,823,482	-	recG	b3652	0.12	-1.4
3,823,562	-	recG	b3652	0.16	-1.4
3,823,574	+	recG	b3652	0.16	-0.5
3,823,582	-	recG	b3652	0.17	+0.2
3,823,629	-	recG	b3652	0.19	-1.8
3,823,641	+	recG	b3652	0.20	-0.1
3,823,649	+	recG	b3652	0.20	+0.0
3,823,662	-	recG	b3652	0.21	-0.0
3,823,690	-	recG	b3652	0.22	-1.0
3,823,690	-	recG	b3652	0.22	+0.3
3,823,751	+	recG	b3652	0.25	-1.7
3,823,751	+	recG	b3652	0.25	-0.8
3,823,776	-	recG	b3652	0.26	-0.1
3,823,793	+	recG	b3652	0.27	+0.0
3,823,805	+	recG	b3652	0.27	-0.2
3,823,823	+	recG	b3652	0.28	-0.2
3,823,831	-	recG	b3652	0.29	-1.1
3,823,881	-	recG	b3652	0.31	+0.1
3,823,883	+	recG	b3652	0.31	-1.2
3,823,925	-	recG	b3652	0.33	-0.7
3,823,969	+	recG	b3652	0.35	+0.9
3,824,052	-	recG	b3652	0.39	-1.6
3,824,052	-	recG	b3652	0.39	-1.6
3,824,061	+	recG	b3652	0.40	-0.2
3,824,085	+	recG	b3652	0.41	-0.9
3,824,088	-	recG	b3652	0.41	-0.6
3,824,112	+	recG	b3652	0.42	-1.5
3,824,142	-	recG	b3652	0.44	-2.8
3,824,163	-	recG	b3652	0.45	-0.7
3,824,193	+	recG	b3652	0.46	-1.6