Strain Fitness in Escherichia coli BW25113 around b1617

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
1,691,458	+	uidB	b1616	0.40	+0.4
1,691,458	+	uidB	b1616	0.40	-0.2
1,691,486	+	uidB	b1616	0.42	-0.4
1,691,489	-	uidB	b1616	0.42	-0.1
1,691,489	-	uidB	b1616	0.42	-0.2
1,691,699	-	uidB	b1616	0.57	+0.2
1,691,699	-	uidB	b1616	0.57	-0.4
1,691,787	-	uidB	b1616	0.64	+0.5
1,691,793	-	uidB	b1616	0.64	-0.2
1,691,867	-	uidB	b1616	0.69	-0.5
1,691,898	+	uidB	b1616	0.72	-0.2
1,691,898	+	uidB	b1616	0.72	+0.4
1,691,963	+	uidB	b1616	0.76	+0.8
1,691,963	+	uidB	b1616	0.76	+0.2
1,691,976	+	uidB	b1616	0.77	+0.2
1,692,031	+	uidB	b1616	0.81	+0.1
1,692,031	+	uidB	b1616	0.81	+0.3
1,692,089	-	uidB	b1616	0.86	+0.1
1,692,195	-				+0.0
1,692,710	-	uidA	b1617	0.24	+0.3
1,692,732	+	uidA	b1617	0.25	+0.4
1,693,129	+	uidA	b1617	0.47	-0.8
1,693,155	-	uidA	b1617	0.48	+2.1
1,693,171	-	uidA	b1617	0.49	+0.3
1,693,171	-	uidA	b1617	0.49	+0.3
1,693,245	-	uidA	b1617	0.53	+0.5
1,693,245	-	uidA	b1617	0.53	+1.1
1,693,388	-	uidA	b1617	0.61	-0.7
1,693,548	-	uidA	b1617	0.70	+0.2
1,693,548	-	uidA	b1617	0.70	+0.0
1,693,571	-	uidA	b1617	0.71	+0.2
1,693,571	-	uidA	b1617	0.71	-0.2
1,693,836	-	uidA	b1617	0.86	-0.2
1,693,954	+				-0.4
1,694,042	-				+0.4
1,694,100	-				-0.0
1,694,177	-				+0.4
1,694,267	-				+0.3
1,694,629	+				-0.7
1,694,629	+	uidR	b1618	0.24	+0.5
1,694,746	-	uidR	b1618	0.44	+0.1
1,694,873	+	uidR	b1618	0.65	+0.2
1,694,873	+	uidR	b1618	0.65	+0.4
1,694,938	+	uidR	b1618	0.76	-0.5
1,695,083	+				-0.3
1,695,089	-				+0.1