Strain Fitness in Escherichia coli BW25113 around b1489

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
1,560,382	-				+0.9
1,560,658	-	ddpX	b1488	0.24	-0.7
1,560,709	+	ddpX	b1488	0.33	-0.4
1,560,869	-	ddpX	b1488	0.60	-1.1
1,560,911	+	ddpX	b1488	0.67	-0.2
1,561,147	-				-0.0
1,561,147	-				-1.6
1,561,159	-				-0.6
1,561,463	-				+0.8
1,561,645	-	b1489	b1489	0.12	-0.9
1,561,695	+	b1489	b1489	0.14	+0.1
1,561,695	+	b1489	b1489	0.14	-1.5
1,561,743	-	b1489	b1489	0.16	-0.5
1,561,808	-	b1489	b1489	0.19	-0.8
1,561,808	-	b1489	b1489	0.19	-1.7
1,562,389	-	b1489	b1489	0.43	-1.5
1,562,389	-	b1489	b1489	0.43	-1.4
1,562,420	-	b1489	b1489	0.44	-0.5
1,562,638	+	b1489	b1489	0.53	-1.5
1,562,881	-	b1489	b1489	0.63	-0.6
1,562,955	+	b1489	b1489	0.67	-1.6
1,562,955	+	b1489	b1489	0.67	-0.7
1,563,208	-	b1489	b1489	0.77	-1.7
1,563,498	-	b1489	b1489	0.89	-1.2
1,563,498	-	b1489	b1489	0.89	-0.6
1,563,503	-	b1489	b1489	0.89	-0.9
1,563,530	+				-1.3
1,563,530	+				-1.2
1,563,539	+				-1.7
1,563,590	-				-2.2
1,563,590	-				-0.8
1,563,800	-				-0.0
1,563,885	+				+0.9
1,563,982	+	yddV	b1490	0.14	-0.6
1,563,987	-	yddV	b1490	0.15	-0.3
1,564,087	-	yddV	b1490	0.22	-0.9
1,564,122	+	yddV	b1490	0.25	-0.3
1,564,122	+	yddV	b1490	0.25	+0.5
1,564,130	-	yddV	b1490	0.25	-0.7
1,564,143	-	yddV	b1490	0.26	+2.1
1,564,180	-	yddV	b1490	0.29	+1.1
1,564,189	+	yddV	b1490	0.29	+0.2
1,564,194	-	yddV	b1490	0.30	-1.3
1,564,197	-	yddV	b1490	0.30	+1.1
1,564,223	+	yddV	b1490	0.32	-0.7
1,564,270	+	yddV	b1490	0.35	-0.8
1,564,270	+	yddV	b1490	0.35	-0.2
1,564,279	-	yddV	b1490	0.36	-1.4
1,564,412	-	yddV	b1490	0.46	-1.5
1,564,451	+	yddV	b1490	0.48	+2.1
1,564,451	+	yddV	b1490	0.48	+0.5
1,564,460	-	yddV	b1490	0.49	+2.1