Strain Fitness in Escherichia coli BW25113 around b1192

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
1,240,433	+	b1191	b1191	0.50	-0.0
1,240,506	+	b1191	b1191	0.55	-0.2
1,240,552	-	b1191	b1191	0.57	+0.1
1,240,627	-	b1191	b1191	0.62	+0.4
1,240,675	-	b1191	b1191	0.64	+0.2
1,240,750	-	b1191	b1191	0.69	+1.9
1,240,974	+	b1191	b1191	0.82	+0.0
1,240,995	-	b1191	b1191	0.83	-0.8
1,240,997	-	b1191	b1191	0.83	-0.0
1,241,032	-	b1191	b1191	0.85	+1.0
1,241,068	+	b1191	b1191	0.87	-0.2
1,241,102	-	b1191	b1191	0.89	+0.5
1,241,102	-	b1191	b1191	0.89	+0.7
1,241,112	+	b1191	b1191	0.89	+0.4
1,241,143	-				+0.1
1,241,159	-				+0.2
1,241,159	-				-0.1
1,241,231	+				+0.6
1,241,231	+				-0.1
1,241,331	+				+0.2
1,241,331	+				+0.5
1,241,424	+				-5.1
1,241,425	-				-3.5
1,241,433	+				-5.2
1,241,501	+	ldcA	b1192	0.12	-6.3
1,241,572	-	ldcA	b1192	0.20	-4.4
1,241,581	+	ldcA	b1192	0.21	-3.4
1,241,747	+	ldcA	b1192	0.39	-1.0
1,241,936	-	ldcA	b1192	0.60	-4.6
1,241,936	-	ldcA	b1192	0.60	-5.5
1,241,961	-	ldcA	b1192	0.63	-4.2
1,241,961	-	ldcA	b1192	0.63	-4.2
1,241,999	-	ldcA	b1192	0.67	-3.4
1,242,033	+	ldcA	b1192	0.70	-4.6
1,242,208	-	ldcA	b1192	0.90	-2.8
1,242,237	-				-3.9
1,242,284	+				-2.7
1,242,305	-				-3.0
1,242,337	+				-0.5
1,242,355	-				-0.4
1,242,365	-				+0.6
1,242,365	-				+0.3
1,242,465	+	mltE	b1193	0.10	+0.5
1,242,655	+	mltE	b1193	0.41	+0.4
1,243,159	+	ycgR	b1194	0.19	-0.2
1,243,291	-	ycgR	b1194	0.37	+0.5
1,243,291	-	ycgR	b1194	0.37	+0.6