Strain Fitness in Escherichia coli BW25113 around b1096

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
1,151,530	-	fabF	b1095	0.30	+3.6
1,151,530	-	fabF	b1095	0.30	+2.9
1,151,535	-	fabF	b1095	0.30	+3.2
1,151,535	-	fabF	b1095	0.30	+2.8
1,151,608	+	fabF	b1095	0.36	+2.7
1,151,608	+	fabF	b1095	0.36	+2.8
1,151,610	+	fabF	b1095	0.36	+2.7
1,151,697	-				+3.0
1,151,697	-	fabF	b1095	0.43	+3.2
1,151,703	-	fabF	b1095	0.44	+3.0
1,151,783	+	fabF	b1095	0.50	+3.1
1,152,010	-	fabF	b1095	0.68	+3.1
1,152,010	-	fabF	b1095	0.68	+2.6
1,152,177	-	fabF	b1095	0.82	+2.7
1,152,219	+	fabF	b1095	0.85	+2.8
1,152,219	+	fabF	b1095	0.85	+2.1
1,152,219	+	fabF	b1095	0.85	+2.8
1,152,332	+				+2.9
1,152,335	+				+2.6
1,152,361	-				+2.8
1,152,361	-				+3.4
1,152,420	+				+0.1
1,152,420	+				-0.3
1,152,474	-				+0.4
1,152,482	-				+0.3
1,152,520	+				+0.1
1,152,520	+				+0.3
1,152,558	+				+0.7
1,152,676	-	pabC	b1096	0.19	+0.2
1,152,788	+	pabC	b1096	0.33	+0.2
1,152,788	+	pabC	b1096	0.33	-0.5
1,152,876	+	pabC	b1096	0.44	+1.0
1,152,902	-	pabC	b1096	0.47	-0.3
1,152,909	+	pabC	b1096	0.48	-0.0
1,152,909	+	pabC	b1096	0.48	+0.4
1,153,012	+	pabC	b1096	0.60	-0.1
1,153,171	+	pabC	b1096	0.80	+0.2
1,153,177	+	pabC	b1096	0.81	+0.5
1,153,208	-	pabC	b1096	0.85	-0.1
1,153,223	+	pabC	b1096	0.86	+1.0
1,153,301	-				-0.2
1,153,412	+				-0.1
1,153,412	+				-0.4
1,153,585	-	yceG	b1097	0.24	-0.4
1,153,597	+	yceG	b1097	0.26	-0.5
1,153,603	-	yceG	b1097	0.26	+0.7
1,153,609	+	yceG	b1097	0.27	+0.4
1,153,656	+	yceG	b1097	0.31	-0.1
1,153,697	-	yceG	b1097	0.35	-0.3
1,153,802	+	yceG	b1097	0.46	-0.4
1,153,907	+	yceG	b1097	0.56	-0.3
1,153,907	+	yceG	b1097	0.56	-0.1
1,153,934	+	yceG	b1097	0.59	-0.5
1,154,104	-	yceG	b1097	0.75	+0.3
1,154,150	+	yceG	b1097	0.80	-0.3
1,154,150	+	yceG	b1097	0.80	-0.7
1,154,152	-	yceG	b1097	0.80	+0.2
1,154,152	-	yceG	b1097	0.80	-0.4
1,154,158	-	yceG	b1097	0.80	-0.1
1,154,158	-	yceG	b1097	0.80	-2.1
1,154,160	-	yceG	b1097	0.81	+1.3
1,154,280	-				-0.3
1,154,323	+				-0.5
1,154,323	+				+0.3