Strain Fitness in Escherichia coli BW25113 around b0878

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
917,467	+	ybjX	b0877	0.12	+0.5
917,467	+	ybjX	b0877	0.12	+0.3
917,528	+	ybjX	b0877	0.18	+0.1
917,528	+	ybjX	b0877	0.18	+0.1
917,643	-	ybjX	b0877	0.29	+0.1
917,658	-	ybjX	b0877	0.31	-0.2
917,658	-	ybjX	b0877	0.31	+0.7
917,775	+	ybjX	b0877	0.43	+0.6
917,828	+	ybjX	b0877	0.48	+1.1
917,838	+	ybjX	b0877	0.49	+0.2
917,878	+	ybjX	b0877	0.53	+0.6
917,878	+	ybjX	b0877	0.53	+0.5
917,891	-	ybjX	b0877	0.54	-0.6
917,948	-	ybjX	b0877	0.60	-0.1
918,050	-	ybjX	b0877	0.70	+0.2
918,059	+	ybjX	b0877	0.71	-0.4
918,271	+				-0.2
918,484	+				-0.3
918,620	+	b0878	b0878	0.15	+0.4
918,789	-	b0878	b0878	0.30	+0.1
918,849	-				-1.9
918,849	-	b0878	b0878	0.35	+0.0
918,985	+	b0878	b0878	0.47	+0.3
919,227	-	b0878	b0878	0.69	-0.3
919,262	+	b0878	b0878	0.72	-0.0
919,262	+	b0878	b0878	0.72	-0.9
919,298	-	b0878	b0878	0.75	-0.0
919,298	-	b0878	b0878	0.75	-0.5
919,343	+	b0878	b0878	0.79	+0.1
919,557	-				-0.1
919,636	+				-0.3
919,765	+	macB	b0879	0.10	-0.3
919,979	+	macB	b0879	0.21	+0.1
919,979	+	macB	b0879	0.21	+0.2
919,994	-	macB	b0879	0.22	+0.2
919,994	-	macB	b0879	0.22	-0.6
920,012	+				+0.6
920,023	+	macB	b0879	0.23	+0.4
920,068	-	macB	b0879	0.26	-0.1
920,199	-	macB	b0879	0.32	-0.1
920,267	+	macB	b0879	0.36	+0.0
920,415	-	macB	b0879	0.43	+0.3
920,443	+	macB	b0879	0.45	-0.8
920,458	-	macB	b0879	0.46	-0.3
920,459	+	macB	b0879	0.46	-0.9
920,459	+	macB	b0879	0.46	-0.7