Strain Fitness in Escherichia coli BW25113 around b2937

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
3,079,977	+				+0.4
3,079,985	-				-0.1
3,080,005	+				-0.5
3,080,126	+	yggG	b2936	0.25	-0.1
3,080,177	+	yggG	b2936	0.32	-0.9
3,080,197	-	yggG	b2936	0.35	-0.3
3,080,220	-	yggG	b2936	0.38	+0.9
3,080,220	-	yggG	b2936	0.38	+0.8
3,080,246	+	yggG	b2936	0.41	-0.4
3,080,275	+	yggG	b2936	0.45	+0.0
3,080,302	-	yggG	b2936	0.48	+1.1
3,080,340	+	yggG	b2936	0.53	-0.0
3,080,348	-	yggG	b2936	0.54	-0.3
3,080,540	+	yggG	b2936	0.80	+0.4
3,080,553	-	yggG	b2936	0.81	+0.5
3,080,626	-				-0.6
3,080,683	+				+0.3
3,080,683	+				-2.7
3,080,691	-				+0.4
3,080,691	-				+0.8
3,080,954	+				-1.5
3,080,954	+				+0.1
3,081,056	-	speB	b2937	0.17	-0.4
3,081,056	-	speB	b2937	0.17	-0.1
3,081,158	+	speB	b2937	0.28	+0.4
3,081,193	-	speB	b2937	0.32	+0.0
3,081,216	-	speB	b2937	0.34	+0.9
3,081,216	-	speB	b2937	0.34	+0.6
3,081,263	+	speB	b2937	0.40	+1.1
3,081,269	-	speB	b2937	0.40	-1.7
3,081,292	+	speB	b2937	0.43	+0.4
3,081,312	+	speB	b2937	0.45	+0.3
3,081,314	+	speB	b2937	0.45	+0.8
3,081,314	+	speB	b2937	0.45	+1.1
3,081,314	+	speB	b2937	0.45	+0.5
3,081,322	-	speB	b2937	0.46	+1.0
3,081,322	-	speB	b2937	0.46	-0.2
3,081,322	-	speB	b2937	0.46	+1.2
3,081,322	-	speB	b2937	0.46	-0.2
3,081,322	-	speB	b2937	0.46	-2.0
3,081,347	-	speB	b2937	0.49	-0.2
3,081,347	-	speB	b2937	0.49	-0.4
3,081,421	+	speB	b2937	0.57	+1.4
3,081,421	+	speB	b2937	0.57	+1.5
3,081,450	+	speB	b2937	0.60	+0.8
3,081,450	+	speB	b2937	0.60	-1.7
3,081,540	-	speB	b2937	0.70	+0.3
3,081,619	+	speB	b2937	0.78	-1.3
3,081,648	+	speB	b2937	0.81	+0.6
3,081,648	+	speB	b2937	0.81	-0.3
3,081,675	-	speB	b2937	0.84	-0.0
3,081,675	-	speB	b2937	0.84	+1.1
3,081,708	+	speB	b2937	0.88	-0.3
3,081,737	+				-0.4
3,081,804	+				+1.1
3,081,830	+				-0.4
3,081,867	+				-1.7
3,081,867	+				-0.4
3,081,956	-				+0.5
3,081,956	-				-0.9
3,081,957	-				-0.2
3,081,984	-				+0.4
3,082,038	-				+0.5
3,082,102	-				+0.0
3,082,153	-				+0.2
3,082,297	+	speA	b2938	0.17	+0.1
3,082,322	-				+1.5
3,082,322	-	speA	b2938	0.18	-0.5
3,082,326	-	speA	b2938	0.19	-0.0
3,082,326	-	speA	b2938	0.19	-1.0
3,082,334	-				+2.8
3,082,337	-	speA	b2938	0.19	+1.3
3,082,362	+	speA	b2938	0.20	-0.2
3,082,362	-	speA	b2938	0.20	-2.7
3,082,370	-	speA	b2938	0.21	-1.8
3,082,372	+	speA	b2938	0.21	-0.4
3,082,414	+	speA	b2938	0.23	-0.0
3,082,422	-	speA	b2938	0.24	-0.1
3,082,430	-	speA	b2938	0.24	+1.0
3,082,461	-	speA	b2938	0.25	-0.7
3,082,652	-	speA	b2938	0.35	+0.1
3,082,667	+	speA	b2938	0.36	-0.7
3,082,667	+	speA	b2938	0.36	-0.6
3,082,742	-	speA	b2938	0.40	+2.2
3,082,778	-	speA	b2938	0.42	-1.4