Strain Fitness in Escherichia coli BW25113 around b1251

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
1,307,613	+	kch	b1250	0.46	-0.9
1,307,613	+	kch	b1250	0.46	-0.4
1,307,620	-	kch	b1250	0.46	+0.7
1,307,820	-	kch	b1250	0.62	-1.0
1,307,827	-	kch	b1250	0.63	-0.5
1,307,895	-	kch	b1250	0.68	+0.8
1,307,994	-	kch	b1250	0.76	-1.0
1,307,994	-	kch	b1250	0.76	-0.9
1,308,003	+	kch	b1250	0.77	+2.3
1,308,045	+	kch	b1250	0.80	+2.3
1,308,061	-	kch	b1250	0.81	+0.7
1,308,061	-	kch	b1250	0.81	+0.1
1,308,068	+	kch	b1250	0.82	-0.3
1,308,103	+	kch	b1250	0.85	-0.5
1,308,110	+	kch	b1250	0.85	+1.5
1,308,256	-				+1.5
1,308,285	+				+0.8
1,308,298	-				-0.7
1,308,300	-				-0.0
1,308,380	+				+0.6
1,308,656	-	yciI	b1251	0.21	-0.7
1,308,663	-	yciI	b1251	0.24	-1.2
1,308,679	-	yciI	b1251	0.29	-2.9
1,308,679	-	yciI	b1251	0.29	-2.0
1,308,732	+	yciI	b1251	0.47	+1.8
1,308,741	-	yciI	b1251	0.50	-1.7
1,308,744	+	yciI	b1251	0.51	-0.1
1,308,744	+	yciI	b1251	0.51	-1.5
1,309,193	+	tonB	b1252	0.11	+0.8
1,309,201	-	tonB	b1252	0.12	+0.3
1,309,201	-	tonB	b1252	0.12	+0.1
1,309,201	-	tonB	b1252	0.12	+1.5
1,309,474	+	tonB	b1252	0.50	+0.4
1,309,533	-	tonB	b1252	0.58	+0.3
1,309,533	-	tonB	b1252	0.58	-0.5
1,309,610	+	tonB	b1252	0.69	-0.4
1,309,705	-	tonB	b1252	0.82	+0.9
1,309,705	-	tonB	b1252	0.82	+0.2